Immune Checkpoint Therapy Drives Maturation of a Cellular Neighborhood Nucleated by T Cell-APC Triads Enabling Spatially Compartmentalized Tumor Immunity

Spatially organized immune hubs of T cells and antigen-presenting cells (APCs) have been linked to immune checkpoint therapy (ICT) efficacy, yet the mechanisms underlying their function remain unclear. Using CODEX multiplex imaging, we longitudinally characterized the dynamic evolution of intratumoral cellular neighborhoods (CN) defined by triad interactions of CD4 and CD8 T cells with two distinct myeloid APC populations: cDC1s and IFN-gamma-activated macrophages. We termed this CN the immunity-promoting CN (IP-CN) and tracked its progressive development during tumor rejection induced by anti-CTLA-4/anti-PD-1 therapy. A coordinated IFN-gamma; and TNF-alpha signaling signature accompanied the IP-CN assembly. Over time, the IP-CN underwent functional maturation, forming specialized sub-neighborhoods that compartmentalized proliferating T cells at the tumor periphery versus cytotoxic T effector cells interacting with tumor cell targets. Our findings reveal a spatiotemporal mechanism by which the IP-CN sustains and amplifies cytotoxic T cell responses, demonstrating how T cell-APC neighborhoods orchestrate tumor immunity.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-04-12
DOI
https://doi.org/10.64898/2026.04.08.716779
Primary Topic
Cancer Immunotherapy and Biomarkers
Type
article
Field-Weighted Citation Impact
0.00

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article

Immune Checkpoint Therapy Drives Maturation of a Cellular Neighborhood Nucleated by T Cell-APC Triads Enabling Spatially Compartmentalized Tumor Immunity

Yuang Song, Bernd H. Zinselmeyer, Hussein Sultan, Bassem Ben Cheikh et al.
bioRxiv (Cold Spring Harbor Laboratory)
Cancer Immunotherapy and Biomarkers
article

Immune Checkpoint Therapy Drives Maturation of a Cellular Neighborhood Nucleated by T Cell-APC Triads Enabling Spatially Compartmentalized Tumor Immunity

Yuang Song, Bernd H. Zinselmeyer, Hussein Sultan, Bassem Ben Cheikh, Yoshiko Takeuchi, Garry P. Nolan, Derek J. Theisen, Vladimir Sukhov, Alexey Sergushichev, Cora D. Arthur, Patrick Leinert, Kathleen C. F. Sheehan, Elham Azizi, Robert D. Schreiber, Maxim N. Artyomov, Kevin Hoffer-Hawlik, Samuel Ameh, Ruan FV Medrano, Bar Rozenman, J. Michael White, Heather N Kohlmiller, Fei Han
article en

Abstract

Spatially organized immune hubs of T cells and antigen-presenting cells (APCs) have been linked to immune checkpoint therapy (ICT) efficacy, yet the mechanisms underlying their function remain unclear. Using CODEX multiplex imaging, we longitudinally characterized the dynamic evolution of intratumoral cellular neighborhoods (CN) defined by triad interactions of CD4 and CD8 T cells with two distinct myeloid APC populations: cDC1s and IFN-gamma-activated macrophages. We termed this CN the immunity-promoting CN (IP-CN) and tracked its progressive development during tumor rejection induced by anti-CTLA-4/anti-PD-1 therapy. A coordinated IFN-gamma; and TNF-alpha signaling signature accompanied the IP-CN assembly. Over time, the IP-CN underwent functional maturation, forming specialized sub-neighborhoods that compartmentalized proliferating T cells at the tumor periphery versus cytotoxic T effector cells interacting with tumor cell targets. Our findings reveal a spatiotemporal mechanism by which the IP-CN sustains and amplifies cytotoxic T cell responses, demonstrating how T cell-APC neighborhoods orchestrate tumor immunity.

bioRxiv (Cold Spring Harbor Laboratory)
Saint Barnabas Medical Center (US), TiGenix (Spain) (ES), Parker Institute for Cancer Immunotherapy (US), Rescon Technologies (United Kingdom) (GB), Washington School of Psychiatry (US), Akoya Biosciences (United States) (US), Columbia University (US), Stanford University (US)
Parker Institute for Cancer Immunotherapy
Openalex Percentile: Top 20%
Cancer Immunotherapy and Biomarkers
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