Bioguided isolation of 8-epideoxyloganic acid from Nepeta italica: In vitro and in silico assessments

In this study, 8‑epideoxyloganic acid (8‑ELA) was isolated from the methanol fraction of Nepeta italica subsp. italica using a bioactivity‑guided approach. The active NIMFr3 fraction was purified, and the structure of 8‑ELA was elucidated by NMR and MS analyses. The compound exhibited significant inhibitory activity against butyrylcholinesterase (BChE) and α‑glucosidase, with IC50 values of 7.768 ± 0.000 and 3.985 ± 0.066 µg/mL, respectively. Enzyme kinetics revealed a non‑competitive inhibition profile for most enzymes, except lipase. Molecular docking and 100 ns molecular dynamics simulations confirmed stable binding orientations, supported by MM‑PBSA free energy calculations (ΔGbind = −1.94 kcal/mol). Density functional theory (DFT) analysis indicated a HOMO–LUMO energy gap of 5.660 eV, while PASS prediction suggested potential anti‑inflammatory, antifungal, and metabolic activities. Overall, this work provides complementary in vitro and in silico insights into 8‑ELA, supporting its potential as a candidate molecule for future pharmacological research.

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Journal
GAZI UNIVERSITY JOURNAL OF SCIENCE
Published
2026-04-11
DOI
https://doi.org/10.35378/gujs.1727978
Primary Topic
Cholinesterase and Neurodegenerative Diseases
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article
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article

Bioguided isolation of 8-epideoxyloganic acid from Nepeta italica: In vitro and in silico assessments

Tevfik Özen, Yunus Başar, Yaşar İpek, Semiha Yenigün et al.
GAZI UNIVERSITY JOURNAL OF SCIENCE
Cholinesterase and Neurodegenerative Diseases
article

Bioguided isolation of 8-epideoxyloganic acid from Nepeta italica: In vitro and in silico assessments

Tevfik Özen, Yunus Başar, Yaşar İpek, Semiha Yenigün, İbrahim Demirtaş, Lütfi Behçet
article en

Abstract

In this study, 8‑epideoxyloganic acid (8‑ELA) was isolated from the methanol fraction of Nepeta italica subsp. italica using a bioactivity‑guided approach. The active NIMFr3 fraction was purified, and the structure of 8‑ELA was elucidated by NMR and MS analyses. The compound exhibited significant inhibitory activity against butyrylcholinesterase (BChE) and α‑glucosidase, with IC50 values of 7.768 ± 0.000 and 3.985 ± 0.066 µg/mL, respectively. Enzyme kinetics revealed a non‑competitive inhibition profile for most enzymes, except lipase. Molecular docking and 100 ns molecular dynamics simulations confirmed stable binding orientations, supported by MM‑PBSA free energy calculations (ΔGbind = −1.94 kcal/mol). Density functional theory (DFT) analysis indicated a HOMO–LUMO energy gap of 5.660 eV, while PASS prediction suggested potential anti‑inflammatory, antifungal, and metabolic activities. Overall, this work provides complementary in vitro and in silico insights into 8‑ELA, supporting its potential as a candidate molecule for future pharmacological research.

GAZI UNIVERSITY JOURNAL OF SCIENCE(Advanced Online Publication)
Bingöl University (TR), Çankırı Karatekin University (TR), Ondokuz Mayıs University (TR), Iğdır Üniversitesi (TR)
Türkiye Bilimsel ve Teknolojik Araştırma Kurumu
Affordable and clean energy
Openalex Percentile: Top 22%
Cholinesterase and Neurodegenerative Diseases
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