New predicted dual CDK-2/CDK-1 inhibitors from Aspergillus unguis isolate SP51-EGY with relative selectivity for colorectal cancer cells: a computational and experimental approach

= 3.49 µg/mL) and a selectivity index (SI = 23.33), indicating relative cytotoxicity against cancer cells. Computational modeling and cellular phenotypic data suggest a potential mechanism of dual CDK2/1 inhibition, forming a testable hypothesis that requires direct enzymatic validation. Compounds corresponding to peaks [7] and [14] have been tentatively assigned as promising CDK inhibitors based on molecular docking studies; due to their: (1) strong binding affinities (-13.23 to -46.05 kcal/mol) confirmed by stable molecular dynamics (RMSD < 2.0 Å); (2) cell cycle arrest mediated by dual CDK2/1 inhibition; and (3) favorable drug-like properties, such as molecular weight < 500 Da, good intestinal absorption, and minimal toxicity. Critical interactions with CDK2 (Tyr16, Phe81) and CDK1 (Met88) active site residues were identified by structural analysis. These interactions competed with ATP to disrupt the CDK2 cyclin A and CDK1/cyclin A/B complexes, which resulted in both G1/S and G2/M cell cycle arrests. These integrated computational and cellular findings suggest that the fungal-derived compounds are promising candidates for novel dual CDK2/CDK1 inhibitors, warranting further experimental validation through biochemical kinase assays.

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Publication Details

Journal
Scientific Reports
Published
2026-04-11
DOI
https://doi.org/10.1038/s41598-026-41120-2
Primary Topic
Cancer-related Molecular Pathways
Type
article
Field-Weighted Citation Impact
0.00

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article

New predicted dual CDK-2/CDK-1 inhibitors from Aspergillus unguis isolate SP51-EGY with relative selectivity for colorectal cancer cells: a computational and experimental approach

Walid Fayad, Faten K. Abd El-Hady, Amal Mosad Ibrahim, Mohamed Abdel-Aziz et al.
Scientific Reports
Cancer-related Molecular Pathways
article

New predicted dual CDK-2/CDK-1 inhibitors from Aspergillus unguis isolate SP51-EGY with relative selectivity for colorectal cancer cells: a computational and experimental approach

Walid Fayad, Faten K. Abd El-Hady, Amal Mosad Ibrahim, Mohamed Abdel-Aziz, Ahmed A. El-Rashedy
article en

Abstract

= 3.49 µg/mL) and a selectivity index (SI = 23.33), indicating relative cytotoxicity against cancer cells. Computational modeling and cellular phenotypic data suggest a potential mechanism of dual CDK2/1 inhibition, forming a testable hypothesis that requires direct enzymatic validation. Compounds corresponding to peaks [7] and [14] have been tentatively assigned as promising CDK inhibitors based on molecular docking studies; due to their: (1) strong binding affinities (-13.23 to -46.05 kcal/mol) confirmed by stable molecular dynamics (RMSD < 2.0 Å); (2) cell cycle arrest mediated by dual CDK2/1 inhibition; and (3) favorable drug-like properties, such as molecular weight < 500 Da, good intestinal absorption, and minimal toxicity. Critical interactions with CDK2 (Tyr16, Phe81) and CDK1 (Met88) active site residues were identified by structural analysis. These interactions competed with ATP to disrupt the CDK2 cyclin A and CDK1/cyclin A/B complexes, which resulted in both G1/S and G2/M cell cycle arrests. These integrated computational and cellular findings suggest that the fungal-derived compounds are promising candidates for novel dual CDK2/CDK1 inhibitors, warranting further experimental validation through biochemical kinase assays.

Scientific ReportsVol. 16(1)
University of Sadat City (EG), National Research Centre (EG)
Science and Technology Development Fund
Good health and well-being
Openalex Percentile: Top 27%
Cancer-related Molecular Pathways
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