A Cautionary Case for Host Assignment Based on Broad Environmental <i>bla</i> <scp> <sub>OXA</sub> </scp> Carriers

genes. Phenotypic testing showed elevated cephalosporin minimal but no carbapenem resistance, consistent with the nature of carbapenem-hydrolysing class D β-lactamases. Our findings reveal that reliance on reference-based metagenomic host prediction can underestimate the diversity of environmental ARG reservoirs. This integrated approach highlights the need for cautious interpretation of metagenomic host assignments and the importance of coupling metagenomic pipelines with culture-dependent validation when assessing ARG ecology in the natural environments.

Authors

Institutions

Publication Details

Journal
Environmental Microbiology Reports
Published
2026-04-01
DOI
https://doi.org/10.1111/1758-2229.70327
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A Cautionary Case for Host Assignment Based on Broad Environmental bla OXA Carriers

Hor‐Gil Hur, Min Ki Jeon, Hanseob Shin
Environmental Microbiology Reports
Antibiotic Resistance in Bacteria
article

A Cautionary Case for Host Assignment Based on Broad Environmental bla OXA Carriers

Hor‐Gil Hur, Min Ki Jeon, Hanseob Shin
article en

Abstract

genes. Phenotypic testing showed elevated cephalosporin minimal but no carbapenem resistance, consistent with the nature of carbapenem-hydrolysing class D β-lactamases. Our findings reveal that reliance on reference-based metagenomic host prediction can underestimate the diversity of environmental ARG reservoirs. This integrated approach highlights the need for cautious interpretation of metagenomic host assignments and the importance of coupling metagenomic pipelines with culture-dependent validation when assessing ARG ecology in the natural environments.

Environmental Microbiology ReportsVol. 18(2)
University of Hawaiʻi at Mānoa (US), University of Iowa (US), University of Hawaii System (US), Iowa State University (US), Gwangju Institute of Science and Technology (KR)
National Research Foundation of Korea
Clean water and sanitation
Openalex Percentile: Top 23%
Antibiotic Resistance in Bacteria
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.