RNA polymerase inhibitors reveal active-site motions essential for the nucleotide-addition cycle

RNAPs, respectively, by binding in a pocket formed by the bridge helix and RH-FL. The precise mechanism of action for these inhibitors is yet to be defined. We present cryo-electron microscopy structures showing that both compounds inhibit the RNAP NAC by preventing RH-FL closure, thereby allosterically destabilizing the closed TL. This work reveals a conserved mechanistic principle of RNAP catalysis across all domains of life and provides new insight for antibiotic design.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-04-07
DOI
https://doi.org/10.64898/2026.04.06.716786
Primary Topic
Bacterial Genetics and Biotechnology
Type
article
Field-Weighted Citation Impact
0.00

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article

RNA polymerase inhibitors reveal active-site motions essential for the nucleotide-addition cycle

Robert Landick, Yukti Dhingra, Elizabeth A Campbell, Seth A Darst
bioRxiv (Cold Spring Harbor Laboratory)
Bacterial Genetics and Biotechnology
article

RNA polymerase inhibitors reveal active-site motions essential for the nucleotide-addition cycle

Robert Landick, Yukti Dhingra, Elizabeth A Campbell, Seth A Darst
article en

Abstract

RNAPs, respectively, by binding in a pocket formed by the bridge helix and RH-FL. The precise mechanism of action for these inhibitors is yet to be defined. We present cryo-electron microscopy structures showing that both compounds inhibit the RNAP NAC by preventing RH-FL closure, thereby allosterically destabilizing the closed TL. This work reveals a conserved mechanistic principle of RNAP catalysis across all domains of life and provides new insight for antibiotic design.

bioRxiv (Cold Spring Harbor Laboratory)
University of Wisconsin System (US), University of Wisconsin–Madison (US), Rockefeller University (US)
National Institutes of Health, University of California, San Diego, Common Fund
Openalex Percentile: Top 27%
Bacterial Genetics and Biotechnology
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RNA polymerase inhibitors reveal active-site motions essential for the nucleotide-addition cycle — Robert Landick, Yukti Dhingra, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS