LINC00607 facilitates endothelial VEGF-A receptor FLT1 splicing

Angiogenesis is a key function of vascular endothelial cells and becomes aberrant in pathologies such as preeclampsia. An important mediator of angiogenesis is vascular endothelial growth factor (VEGF) receptor FLT1; however, alternative splicing of FLT1 can generate soluble FLT1 (sFLT1), a decoy receptor that inhibits VEGF signaling. While some long non-coding RNAs (lncRNAs) are known to regulate splicing, their roles in endothelial biology remain poorly defined. Here, we identify lncRNA LINC00607 as a critical regulator of FLT1 alternative splicing. Loss of LINC00607 increased the formation of the anti-angiogenic sFLT1. CRISPR-mediated knockout of LINC00607 promoted exon 15 inclusion in FLT1, elevating sFLT1 levels and blunting VEGF-driven angiogenesis-a defect reversed by sFLT1-neutralizing antibodies. LINC00607 interacted with U2 small nuclear RNA (snRNA) to regulate exon 15 inclusion in FLT1, an interaction dependent on the chromatin-remodeler BRG1. A splice-blocking morpholino targeting the FLT1 intron14/exon15 junction specifically inhibited sFLT1 production by interacting with LINC00607 and U2 snRNA, and its application increased VEGF-A-mediated sprouting. LINC00607 expression inversely correlated with sFLT1 levels in vascular diseases. In preeclampsia, a multisystem pregnancy disorder involving hypertension and proteinuria, LINC00607 was downregulated in early and late-stage preeclampsia compared with healthy pregnancies. LINC00607 therefore fine-tunes VEGF signaling and might contribute to the pathophysiology of preeclampsia.

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Journal
Molecular Therapy
Published
2026-04-01
DOI
https://doi.org/10.1016/j.ymthe.2026.03.038
Primary Topic
Angiogenesis and VEGF in Cancer
Type
article
Field-Weighted Citation Impact
0.00

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article

LINC00607 facilitates endothelial VEGF-A receptor FLT1 splicing

Ilka Wittig, James A. Oo, Timothy Warwick, Olivia Nonn et al.
Molecular Therapy
Angiogenesis and VEGF in Cancer
article

LINC00607 facilitates endothelial VEGF-A receptor FLT1 splicing

Ilka Wittig, James A. Oo, Timothy Warwick, Olivia Nonn, Agnes Krüger, Michaela Müller-McNicoll, Matthias S. Leisegang, Nina‐Naomi Kreis, Judit Izquierdo Ponce, Andrew Howard Baker, Ralf Dechend, Frank Louwen, Ralf Peter Brandes, Marie E. Bayer, Praveenya Tirunagari, Stefan Günther, Frederike Lam, Anastasiia Diagel, Thomas Walther, Reinier A. Boon, Zhifen Chen
article en

Abstract

Angiogenesis is a key function of vascular endothelial cells and becomes aberrant in pathologies such as preeclampsia. An important mediator of angiogenesis is vascular endothelial growth factor (VEGF) receptor FLT1; however, alternative splicing of FLT1 can generate soluble FLT1 (sFLT1), a decoy receptor that inhibits VEGF signaling. While some long non-coding RNAs (lncRNAs) are known to regulate splicing, their roles in endothelial biology remain poorly defined. Here, we identify lncRNA LINC00607 as a critical regulator of FLT1 alternative splicing. Loss of LINC00607 increased the formation of the anti-angiogenic sFLT1. CRISPR-mediated knockout of LINC00607 promoted exon 15 inclusion in FLT1, elevating sFLT1 levels and blunting VEGF-driven angiogenesis-a defect reversed by sFLT1-neutralizing antibodies. LINC00607 interacted with U2 small nuclear RNA (snRNA) to regulate exon 15 inclusion in FLT1, an interaction dependent on the chromatin-remodeler BRG1. A splice-blocking morpholino targeting the FLT1 intron14/exon15 junction specifically inhibited sFLT1 production by interacting with LINC00607 and U2 snRNA, and its application increased VEGF-A-mediated sprouting. LINC00607 expression inversely correlated with sFLT1 levels in vascular diseases. In preeclampsia, a multisystem pregnancy disorder involving hypertension and proteinuria, LINC00607 was downregulated in early and late-stage preeclampsia compared with healthy pregnancies. LINC00607 therefore fine-tunes VEGF signaling and might contribute to the pathophysiology of preeclampsia.

Molecular Therapy
Goethe University Frankfurt (DE), Maastricht University (NL), Humboldt-Universität zu Berlin (DE), Max Planck Institute for Heart and Lung Research (DE), Max Planck Institute of Biophysics (DE), German Centre for Cardiovascular Research (DE), University Hospital Frankfurt (DE), Deutsches Herzzentrum München (DE)
Deutsches Zentrum für Herz-Kreislaufforschung, British Heart Foundation, Deutsche Forschungsgemeinschaft, Hartstichting, Dr. Rolf M. Schwiete Stiftung
Openalex Percentile: Top 27%
Angiogenesis and VEGF in Cancer
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