Abstract 4834: Keratin 17 correlates with epithelial-to-mesenchymal transition in pancreatic ductal adenocarcinoma

Abstract Background: Pancreatic ductal adenocarcinoma (PDAC) accounts for more than 90% of all pancreatic malignancies and has a 5-year survival rate of 13%. Approximately, 80% of the patients are diagnosed at later stages with metastatic disease characterized by widespread invasion. One of the key biological pathways that lead to this metastatic spread is Epithelial to Mesenchymal Transition (EMT) - a highly plastic process that allows cancer cells to gain invasive properties by switching from an epithelial to a mesenchymal phenotype. Keratin 17 (K17), a component of the basal-like PDAC signature associated with poor prognosis, has been shown to promote pancreatic cancer metastases and induce EMT in bladder, esophageal, and lung cancers. In this study, we test the hypothesis that K17 is associated with EMT in PDAC, contributing to the poor prognosis of the disease. Methods: We performed integrative single-cell transcriptomic analyses (scRNA-seq) of publicly available datasets comprising of 42 treatment-naïve PDACs to identify cancer-related pathways associated with K17 expression. Differential gene expression and pathway enrichment analyses were conducted in RStudio using the Hallmark gene sets from MSigDB and Gene Ontology (GO) terms. To validate the scRNA-seq results, we performed cyclic multiplex immunofluorescence imaging using the MACSima platform on FFPE tissue microarrays, along with immunohistochemistry (IHC) on whole-slide FFPE sections of human PDAC samples. These analyses were conducted to assess the spatial distribution of K17 and its correlation with the expression of top EMT-associated markers identified through scRNA-seq. Results: scRNA-seq analysis revealed that K17-positive PDAC cells exhibited transcriptional enrichment of the EMT pathway, with ANXA1, S100A4, GPC1, LAMC2, WWTR1, and LAMA3 identified as top associated markers. Multiplex immunofluorescence image analysis confirmed that K17-positive tumor regions displayed reduced epithelial differentiation as indicated by low GATA-6 and E-cadherin score. Among the markers identified by scRNA-seq, LAMC2, an established biomarker of EMT, demonstrated the most significant positive correlation with K17 and was confirmed using IHC. Conclusions: K17 marks a transcriptionally distinct and highly invasive PDAC subpopulation characterized by robust EMT activation. LAMC2 emerges as the EMT marker most closely associated with K17 at both transcriptomic and protein levels, suggesting a K17-LAMC2 axis that maybe a major driver of EMT in PDAC. Citation Format: Shayan Sarkar, Lyanne Delgado Coka, Robert S. Powers, Natalia Marchenko, Kenneth Shroyer. Keratin 17 correlates with epithelial-to-mesenchymal transition in pancreatic ductal adenocarcinoma [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 4834.

Authors

Institutions

Publication Details

Journal
Cancer Research
Published
2026-04-03
DOI
https://doi.org/10.1158/1538-7445.am2026-4834
Primary Topic
Skin and Cellular Biology Research
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Abstract 4834: Keratin 17 correlates with epithelial-to-mesenchymal transition in pancreatic ductal adenocarcinoma

Shayan Sarkar, Lyanne Delgado Coka, Natalia Marchenko, Kenneth Shroyer
Cancer Research
Skin and Cellular Biology Research
article

Abstract 4834: Keratin 17 correlates with epithelial-to-mesenchymal transition in pancreatic ductal adenocarcinoma

Shayan Sarkar, Lyanne Delgado Coka, Natalia Marchenko, Kenneth Shroyer
article en

Abstract

Abstract Background: Pancreatic ductal adenocarcinoma (PDAC) accounts for more than 90% of all pancreatic malignancies and has a 5-year survival rate of 13%. Approximately, 80% of the patients are diagnosed at later stages with metastatic disease characterized by widespread invasion. One of the key biological pathways that lead to this metastatic spread is Epithelial to Mesenchymal Transition (EMT) - a highly plastic process that allows cancer cells to gain invasive properties by switching from an epithelial to a mesenchymal phenotype. Keratin 17 (K17), a component of the basal-like PDAC signature associated with poor prognosis, has been shown to promote pancreatic cancer metastases and induce EMT in bladder, esophageal, and lung cancers. In this study, we test the hypothesis that K17 is associated with EMT in PDAC, contributing to the poor prognosis of the disease. Methods: We performed integrative single-cell transcriptomic analyses (scRNA-seq) of publicly available datasets comprising of 42 treatment-naïve PDACs to identify cancer-related pathways associated with K17 expression. Differential gene expression and pathway enrichment analyses were conducted in RStudio using the Hallmark gene sets from MSigDB and Gene Ontology (GO) terms. To validate the scRNA-seq results, we performed cyclic multiplex immunofluorescence imaging using the MACSima platform on FFPE tissue microarrays, along with immunohistochemistry (IHC) on whole-slide FFPE sections of human PDAC samples. These analyses were conducted to assess the spatial distribution of K17 and its correlation with the expression of top EMT-associated markers identified through scRNA-seq. Results: scRNA-seq analysis revealed that K17-positive PDAC cells exhibited transcriptional enrichment of the EMT pathway, with ANXA1, S100A4, GPC1, LAMC2, WWTR1, and LAMA3 identified as top associated markers. Multiplex immunofluorescence image analysis confirmed that K17-positive tumor regions displayed reduced epithelial differentiation as indicated by low GATA-6 and E-cadherin score. Among the markers identified by scRNA-seq, LAMC2, an established biomarker of EMT, demonstrated the most significant positive correlation with K17 and was confirmed using IHC. Conclusions: K17 marks a transcriptionally distinct and highly invasive PDAC subpopulation characterized by robust EMT activation. LAMC2 emerges as the EMT marker most closely associated with K17 at both transcriptomic and protein levels, suggesting a K17-LAMC2 axis that maybe a major driver of EMT in PDAC. Citation Format: Shayan Sarkar, Lyanne Delgado Coka, Robert S. Powers, Natalia Marchenko, Kenneth Shroyer. Keratin 17 correlates with epithelial-to-mesenchymal transition in pancreatic ductal adenocarcinoma [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 4834.

Cancer ResearchVol. 86(7_Supplement)
Stony Brook School (US)
No poverty
Openalex Percentile: Top 31%
Skin and Cellular Biology Research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.