Active Site Structure and Mechanism of a Molybdenum Catechol Dehydroxylase
Hcdh) using Mo K-edge X-ray absorption near-edge structure (XANES) spectroscopy and extended X-ray absorption fine structure (EXAFS) analyses. In the oxidized state, the Mo(VI) ion is coordinated by a terminal oxo atom, a cysteine thiolate, and four sulfur atoms from the two bidentate pyranopterin dithiolene (PDT) ligands. Upon reduction to the Mo(IV) state, the active site remains hexacoordinate with a similar first coordination sphere; however, the terminal oxo ligand present in the Mo(VI) state has been protonated to yield a coordinated hydroxyl ligand. The EXAFS-derived coordination geometries for the Mo(VI) and Mo(IV) sites are consistent with the results of bond valence sum (BVS) analyses. Reaction coordinate computations suggest the likely role of an active site carboxylate in facilitating substrate dearomatization and product formation. Protein sequence analysis and site-directed mutagenesis experiments reveal that Cys157 is ligated to the Mo ion, and Asp210 serves as a catalytically essential active site acid-base. Together, these analyses enrich our understanding of an emerging pyranopterin molybdenum enzyme family from the human gut microbiota.
Authors
- Martin L. Kirk (ORCID: https://orcid.org/0000-0002-1479-3318)
- Khadanand KC (ORCID: https://orcid.org/0000-0002-1258-8636)
- Minwoo Bae (ORCID: https://orcid.org/0000-0002-0313-5520)
- Joshua Mengell (ORCID: https://orcid.org/0000-0003-0727-2925)
- Quyen Nguyen (ORCID: https://orcid.org/0009-0001-7232-8932)
- Emily P. Balskus (ORCID: https://orcid.org/0000-0001-5985-5714)
- Xueyang Dong
- Jing Yang
Institutions
- Howard Hughes Medical Institute (US)
- University of New Mexico (US)
- Harvard University Press (US)
Publication Details
- Journal
- Journal of the American Chemical Society
- Published
- 2026-03-31
- DOI
- https://doi.org/10.1021/jacs.5c20654
- Primary Topic
- Metalloenzymes and iron-sulfur proteins
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Kwanjeong Educational Foundation
- National Social Science Fund of China
- National Institute of General Medical Sciences