Chromosome level genome assembly of Camellia sinensis ‘Yuwan Xiaoye’

Tea is one of the oldest crops in the world and is of great economic value as a beverage. Its natural flavor and compounds related to health exhibit significant genetic diversity. This article reports the chromosome-scale genome assembly map of a new Camellia sinensis 'Yuwan Xiaoye' (YWXY) bred by our research center. The genome size is 3.18 Gb with a contig N50 of 181.8 Mb, and 93.43% of the assembled sequences were anchored to 15 chromosomes. The genome is predicted to contain 40,119 protein-coding genes, with 99.70% having functional annotations. Repeat elements account for approximately 82.21% of the genomic landscape. The completeness of YWXY genome assembly is highlighted by a BUSCO score of 99.07%. The assembled genome provides a critical resource for molecular breeding and functional studies in tea plants.

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Publication Details

Journal
Scientific Data
Published
2026-04-01
DOI
https://doi.org/10.1038/s41597-026-07142-1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
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article

Chromosome level genome assembly of Camellia sinensis ‘Yuwan Xiaoye’

Yuqiong Chen, Wei Zhang
Scientific Data
Genomics and Phylogenetic Studies
article

Chromosome level genome assembly of Camellia sinensis ‘Yuwan Xiaoye’

Yuqiong Chen, Wei Zhang
article en

Abstract

Tea is one of the oldest crops in the world and is of great economic value as a beverage. Its natural flavor and compounds related to health exhibit significant genetic diversity. This article reports the chromosome-scale genome assembly map of a new Camellia sinensis 'Yuwan Xiaoye' (YWXY) bred by our research center. The genome size is 3.18 Gb with a contig N50 of 181.8 Mb, and 93.43% of the assembled sequences were anchored to 15 chromosomes. The genome is predicted to contain 40,119 protein-coding genes, with 99.70% having functional annotations. Repeat elements account for approximately 82.21% of the genomic landscape. The completeness of YWXY genome assembly is highlighted by a BUSCO score of 99.07%. The assembled genome provides a critical resource for molecular breeding and functional studies in tea plants.

Scientific Data
Xinyang Normal University (CN), Huazhong Agricultural University (CN)
Zero hunger
Openalex Percentile: Top 12%
Genomics and Phylogenetic Studies
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