AI-ready design of realistic 2D materials and interfaces with Mat3ra-2D

Artificial intelligence (AI) and machine learning (ML) models in materials science are predominantly trained on ideal bulk crystals, limiting their transferability to real-world applications where surfaces, interfaces, and defects dominate. We present Mat3ra-2D, an open-source framework for the rapid design of realistic two-dimensional materials and related structures, including slabs and heterogeneous interfaces, with support for disorder and defect-driven complexity. The approach combines: (1) well-defined standards for storing and exchanging materials data with a modular implementation of core concepts and (2) transformation workflows expressed as configuration-builder pipelines that preserve provenance and metadata. We implement typical structure generation tasks, such as constructing orientation-specific slabs or strain-matching interfaces, in reusable Jupyter notebooks that serve as both interactive documentation and templates for reproducible runs. To lower the barrier to adoption, we design the examples to run in any web browser and demonstrate how to incorporate these developments into a web application. Mat3ra-2D enables systematic creation, provenance tracking, inspection, and reuse of realistic 2D- and interface-aware structures, providing the structure-generation layer needed for future AI/ML dataset construction for training.

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Publication Details

Journal
Scientific Reports
Published
2026-10-14
DOI
https://doi.org/10.1038/s41598-026-72825-z
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

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article

AI-ready design of realistic 2D materials and interfaces with Mat3ra-2D

Timur Bazhirov, Vsevolod Biryukov, Kamal Choudhary
Scientific Reports
Machine Learning in Materials Science
article

AI-ready design of realistic 2D materials and interfaces with Mat3ra-2D

Timur Bazhirov, Vsevolod Biryukov, Kamal Choudhary
article en

Abstract

Artificial intelligence (AI) and machine learning (ML) models in materials science are predominantly trained on ideal bulk crystals, limiting their transferability to real-world applications where surfaces, interfaces, and defects dominate. We present Mat3ra-2D, an open-source framework for the rapid design of realistic two-dimensional materials and related structures, including slabs and heterogeneous interfaces, with support for disorder and defect-driven complexity. The approach combines: (1) well-defined standards for storing and exchanging materials data with a modular implementation of core concepts and (2) transformation workflows expressed as configuration-builder pipelines that preserve provenance and metadata. We implement typical structure generation tasks, such as constructing orientation-specific slabs or strain-matching interfaces, in reusable Jupyter notebooks that serve as both interactive documentation and templates for reproducible runs. To lower the barrier to adoption, we design the examples to run in any web browser and demonstrate how to incorporate these developments into a web application. Mat3ra-2D enables systematic creation, provenance tracking, inspection, and reuse of realistic 2D- and interface-aware structures, providing the structure-generation layer needed for future AI/ML dataset construction for training.

Scientific Reports
Johns Hopkins University (US)
National Institute of Standards and Technology
Openalex Percentile: Top 86%
Machine Learning in Materials Science
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