Model-Informed Precision Dosing of Thiopurines in Inflammatory Bowel Disease through Pharmacometric Integration of TPMT and NUDT15 Genotypes

Introduction/Objective: Thiopurines (azathioprine, 6-mercaptopurine) are pivotal for IBD remission induction but possess a narrow therapeutic index and large PK/PD variability. We assess integrating TPMT and NUDT15 genotyping with pharmacometric models to support genotype-directed, model-informed precision dosing beyond empiric approaches and traditional therapeutic drug monitoring. Methods: We performed a narrative review of pharmacometric and pharmacogenetic research, evaluating (i) genotype–phenotype correlation for TPMT and NUDT15 by ancestry; (ii) population PK/PD and Bayesian or nonlinear mixed-effects modeling with genetic, biochemical, and co-medication covariates; and (iii) biomarker approaches comparing red-cell 6-thioguanine nucleotide assays vs. DNA-thioguanine, and clinical outcomes. Results: NUDT15 R139C alleles impart high early-onset leukopenic risk at nominal doses, particularly in East/South Asians, challenging genotype-blind dosing and conventional 6-TGN–based monitoring. TPMT polymorphisms, despite their traditional prominence, exhibit genotype–phenotype discordance and diminished predictive value outside of primarily Caucasian populations. Bayesian and mixed-effects models of the present day provide individualized dosing in real time; however, widely generalizable, genotype-normalized PK/PD paradigms and routine inclusion of higher-resolution biomarkers like DNA-TG are limited. Discussion: Dependence on historic TDM and TPMT-favoring strategies is inadequate in heterogeneous populations and for NUDT15 variant-associated early toxicity. Incorporation of diplotype-directed MIPD with solid PK/PD modeling and improved biomarkers may change thiopurine treatment from dose-measure-reactive to dose-predictive. Challenges involve ancestry-sensitive algorithms, standardized DNA-TG assays, and EHR-based, validated decision support. Conclusion MIPD combining TPMT/NUDT15 diplotypes, adaptive PK/PD modeling, and high-resolution biomarkers can make thiopurine treatment in IBD a modernized reality. Widespread implementation necessitates ancestry-adapted, clinically established algorithms, decision support, and multicenter testing to provide safe, effective, and equitable dosing.

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Journal
Current pharmacogenomics and personalized medicine (Online)/Current pharmacogenomics and personalized medicine
Published
2026-03-27
DOI
https://doi.org/10.2174/0118756921431461260218091224
Primary Topic
Acute Lymphoblastic Leukemia research
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article
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article

Model-Informed Precision Dosing of Thiopurines in Inflammatory Bowel Disease through Pharmacometric Integration of TPMT and NUDT15 Genotypes

Ain U., Kalpana Devi M, Anand Kumar S, Thilagesh P et al.
Current pharmacogenomics and personalized medicine (Online)/Current pharmacogenomics and personalized medicine
Acute Lymphoblastic Leukemia research
article

Model-Informed Precision Dosing of Thiopurines in Inflammatory Bowel Disease through Pharmacometric Integration of TPMT and NUDT15 Genotypes

Ain U., Kalpana Devi M, Anand Kumar S, Thilagesh P, Akshaya Krishnan, Gokilavani S, Shankar Ganesh M
article en

Abstract

Introduction/Objective: Thiopurines (azathioprine, 6-mercaptopurine) are pivotal for IBD remission induction but possess a narrow therapeutic index and large PK/PD variability. We assess integrating TPMT and NUDT15 genotyping with pharmacometric models to support genotype-directed, model-informed precision dosing beyond empiric approaches and traditional therapeutic drug monitoring. Methods: We performed a narrative review of pharmacometric and pharmacogenetic research, evaluating (i) genotype–phenotype correlation for TPMT and NUDT15 by ancestry; (ii) population PK/PD and Bayesian or nonlinear mixed-effects modeling with genetic, biochemical, and co-medication covariates; and (iii) biomarker approaches comparing red-cell 6-thioguanine nucleotide assays vs. DNA-thioguanine, and clinical outcomes. Results: NUDT15 R139C alleles impart high early-onset leukopenic risk at nominal doses, particularly in East/South Asians, challenging genotype-blind dosing and conventional 6-TGN–based monitoring. TPMT polymorphisms, despite their traditional prominence, exhibit genotype–phenotype discordance and diminished predictive value outside of primarily Caucasian populations. Bayesian and mixed-effects models of the present day provide individualized dosing in real time; however, widely generalizable, genotype-normalized PK/PD paradigms and routine inclusion of higher-resolution biomarkers like DNA-TG are limited. Discussion: Dependence on historic TDM and TPMT-favoring strategies is inadequate in heterogeneous populations and for NUDT15 variant-associated early toxicity. Incorporation of diplotype-directed MIPD with solid PK/PD modeling and improved biomarkers may change thiopurine treatment from dose-measure-reactive to dose-predictive. Challenges involve ancestry-sensitive algorithms, standardized DNA-TG assays, and EHR-based, validated decision support. Conclusion MIPD combining TPMT/NUDT15 diplotypes, adaptive PK/PD modeling, and high-resolution biomarkers can make thiopurine treatment in IBD a modernized reality. Widespread implementation necessitates ancestry-adapted, clinically established algorithms, decision support, and multicenter testing to provide safe, effective, and equitable dosing.

Current pharmacogenomics and personalized medicine (Online)/Current pharmacogenomics and personalized medicineVol. 23
Tamil Nadu Dr. M.G.R. Medical University (IN), Excel Life Sciences (India) (IN), Hindu College of Pharmacy (IN), Salem College (US)
Reduced inequalities
Openalex Percentile: Top 2%
Acute Lymphoblastic Leukemia research
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