Encoding Nucleobase Sequences to Synthetic Polyesters Using Adenine/Thymine-Containing Isocyanides as Gluing Components for the Passerini IEG

DNA exhibits programmable self-assembly through complementary hydrogen bonding between nucleobases introduced to sugar-phosphate backbones in defined sequences, inspiring the development of synthetic analogs with nucleobases as recognition motifs. However, most nucleobase-containing polymers lack defined monomer sequences or molecular uniformity, limiting their biomimetic precision. In this work, we synthesized sequence-defined polymers bearing adenine and thymine units via a Passerini iterative exponential growth strategy. Butoxycarbonyl (Boc)-protected nucleobase-functionalized isocyanides were employed to construct poly(hydroxybutyrate) bearing butyl- and bp-thymine side chains and poly(hydroxybutyrate) with butyl- and bp-adenine side chains with uniform molecular weights. After Boc deprotection, NMR analyses revealed complementary adenine-thymine hydrogen bonding, showing characteristic downfield shifts in a 1:1 mixture, an association constant of 320 M<sup>-1</sup> obtained by NMR titration, and thermoreversible behavior in variable-temperature NMR experiments. Furthermore, adenine and thymine were incorporated into a single polymer backbone, demonstrating the method's ability to encode programmable hydrogen-bonding motifs into uniform synthetic macromolecules.

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Publication Details

Journal
Biomacromolecules
Published
2026-03-28
DOI
https://doi.org/10.1021/acs.biomac.6c00143
Primary Topic
DNA and Nucleic Acid Chemistry
Type
article
Field-Weighted Citation Impact
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article

Encoding Nucleobase Sequences to Synthetic Polyesters Using Adenine/Thymine-Containing Isocyanides as Gluing Components for the Passerini IEG

S.H. Kim, Heejeong Jang, Hyojoo Noh
Biomacromolecules
DNA and Nucleic Acid Chemistry
article

Encoding Nucleobase Sequences to Synthetic Polyesters Using Adenine/Thymine-Containing Isocyanides as Gluing Components for the Passerini IEG

S.H. Kim, Heejeong Jang, Hyojoo Noh
article en

Abstract

DNA exhibits programmable self-assembly through complementary hydrogen bonding between nucleobases introduced to sugar-phosphate backbones in defined sequences, inspiring the development of synthetic analogs with nucleobases as recognition motifs. However, most nucleobase-containing polymers lack defined monomer sequences or molecular uniformity, limiting their biomimetic precision. In this work, we synthesized sequence-defined polymers bearing adenine and thymine units via a Passerini iterative exponential growth strategy. Butoxycarbonyl (Boc)-protected nucleobase-functionalized isocyanides were employed to construct poly(hydroxybutyrate) bearing butyl- and bp-thymine side chains and poly(hydroxybutyrate) with butyl- and bp-adenine side chains with uniform molecular weights. After Boc deprotection, NMR analyses revealed complementary adenine-thymine hydrogen bonding, showing characteristic downfield shifts in a 1:1 mixture, an association constant of 320 M<sup>-1</sup> obtained by NMR titration, and thermoreversible behavior in variable-temperature NMR experiments. Furthermore, adenine and thymine were incorporated into a single polymer backbone, demonstrating the method's ability to encode programmable hydrogen-bonding motifs into uniform synthetic macromolecules.

Biomacromolecules
Seoul National University (KR)
Openalex Percentile: Top 4%
DNA and Nucleic Acid Chemistry
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