Chromosome-level genomes of hard clams Meretrix lamarckii (Deshayes, 1853) and Meretrix meretrix (Linnaeus, 1758)

The genus Meretrix contains marine bivalve molluscs commonly known as the Venus clams or hard clams, which can be found in the estuarine and marine habitats in Asia. Given their edibility, they have been exploited in clam digging activities and also been farmed in some places. Here, we provide two new high-quality genomes of species M. meretrix and M. lamarckii. Utilising a combination of PacBio HiFi and Omni-C sequencing technologies, genome assemblies of M. meretrix and M. lamarcki are obtained with sizes 835.1 Mb (scaffold N50 = 46 Mb) and 890.5 Mb (scaffold N50 = 46 Mb), respectively. More than 99% of sequences were anchored to 19 pseudochromosomes, and high completeness was also obtained estimated by BUSCO scores (~99.5%, mollusca_odb12). The two new genomic resources provided in this study will be useful for further understanding biology, ecology, and evolution of edible clams.

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Journal
Scientific Data
Published
2026-03-27
DOI
https://doi.org/10.1038/s41597-026-07119-0
Primary Topic
Marine Bivalve and Aquaculture Studies
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article
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article

Chromosome-level genomes of hard clams Meretrix lamarckii (Deshayes, 1853) and Meretrix meretrix (Linnaeus, 1758)

Shing Yip Lee, Ming Fung Franco Au, Syk Law, Cheryl Wood Yee Shum et al.
Scientific Data
Marine Bivalve and Aquaculture Studies
article

Chromosome-level genomes of hard clams Meretrix lamarckii (Deshayes, 1853) and Meretrix meretrix (Linnaeus, 1758)

Shing Yip Lee, Ming Fung Franco Au, Syk Law, Cheryl Wood Yee Shum, LP Cheung, Siu Gin Cheung, Jerome Ho Lam Hui, Wenyan Nong
article en

Abstract

The genus Meretrix contains marine bivalve molluscs commonly known as the Venus clams or hard clams, which can be found in the estuarine and marine habitats in Asia. Given their edibility, they have been exploited in clam digging activities and also been farmed in some places. Here, we provide two new high-quality genomes of species M. meretrix and M. lamarckii. Utilising a combination of PacBio HiFi and Omni-C sequencing technologies, genome assemblies of M. meretrix and M. lamarcki are obtained with sizes 835.1 Mb (scaffold N50 = 46 Mb) and 890.5 Mb (scaffold N50 = 46 Mb), respectively. More than 99% of sequences were anchored to 19 pseudochromosomes, and high completeness was also obtained estimated by BUSCO scores (~99.5%, mollusca_odb12). The two new genomic resources provided in this study will be useful for further understanding biology, ecology, and evolution of edible clams.

Scientific Data
Griffith University (AU), City University of Hong Kong (HK), Chinese University of Hong Kong (HK)
Life below water
Openalex Percentile: Top 3%
Marine Bivalve and Aquaculture Studies
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Chromosome-level genomes of hard clams Meretrix lamarckii (Deshayes, 1853) and Meretrix meretrix (Linnaeus, 1758) — Shing Yip Lee, Ming Fung Franco Au, et al. · Scientific Data (2026) | TGRS Research Map | TGRS