Structural Features and Mitogenome-Based Evolutionary Insights into Acanthopleura loochooana (Polyplacophora: Chitonidae)

Acanthopleura loochooana is a widely distributed intertidal chiton in the northwestern Pacific, yet its mitochondrial genomic architecture and evolutionary position within Chitonidae have not been comprehensively evaluated. In this study, we sequenced and analyzed the complete mitochondrial genome of A. loochooana using next-generation sequencing. The mitogenome is a circular double-stranded DNA molecule of 15,295 bp that contains the typical 37 mitochondrial genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes, and 2 ribosomal RNA genes. Codon usage patterns show a clear preference for A- or U-ending codons, consistent with trends observed in other polyplacophoran mitogenomes. Phylogenetic analyses based on concatenated sequences of the 13 mitochondrial PCGs under Bayesian frameworks recovered congruent topologies with strong nodal support. A. loochooana was placed in a well-supported clade with Liolophura japonica and A. vaillantii, providing a reference within Acanthopleurinae. These results provide the complete mitochondrial genome of A. loochooana and contribute new mitogenomic data to the currently limited dataset of Polyplacophora, offering additional insights into mitochondrial genome organization and phylogenetic relationships within Acanthopleurinae.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2026-03-27
DOI
https://doi.org/10.3390/ijms27073053
Primary Topic
Marine Biology and Ecology Research
Type
article
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article

Structural Features and Mitogenome-Based Evolutionary Insights into Acanthopleura loochooana (Polyplacophora: Chitonidae)

Qing-Yan Wu, Longjiang MAO, Xinyue Que, Guangcheng Chen et al.
International Journal of Molecular Sciences
Marine Biology and Ecology Research
article

Structural Features and Mitogenome-Based Evolutionary Insights into Acanthopleura loochooana (Polyplacophora: Chitonidae)

Qing-Yan Wu, Longjiang MAO, Xinyue Que, Guangcheng Chen, Bingpeng Xing, Peng Xiang, Yifan Zou
article en

Abstract

Acanthopleura loochooana is a widely distributed intertidal chiton in the northwestern Pacific, yet its mitochondrial genomic architecture and evolutionary position within Chitonidae have not been comprehensively evaluated. In this study, we sequenced and analyzed the complete mitochondrial genome of A. loochooana using next-generation sequencing. The mitogenome is a circular double-stranded DNA molecule of 15,295 bp that contains the typical 37 mitochondrial genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes, and 2 ribosomal RNA genes. Codon usage patterns show a clear preference for A- or U-ending codons, consistent with trends observed in other polyplacophoran mitogenomes. Phylogenetic analyses based on concatenated sequences of the 13 mitochondrial PCGs under Bayesian frameworks recovered congruent topologies with strong nodal support. A. loochooana was placed in a well-supported clade with Liolophura japonica and A. vaillantii, providing a reference within Acanthopleurinae. These results provide the complete mitochondrial genome of A. loochooana and contribute new mitogenomic data to the currently limited dataset of Polyplacophora, offering additional insights into mitochondrial genome organization and phylogenetic relationships within Acanthopleurinae.

International Journal of Molecular SciencesVol. 27(7)
Kunsan National University (KR), Nanjing University of Information Science and Technology (CN), Ministry of Natural Resources (CN), Fujian Institute of Oceanography (CN)
Life below water
Openalex Percentile: Top 4%
Marine Biology and Ecology Research
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