Can You Help ChatGPT Get an “A” in Organic Chemistry? Teaching Effective Prompting of Large Language Models for Reaction Prediction

As generative artificial intelligence (AI) tools such as large language models (LLMs) become widespread, they are increasingly finding applications in chemical sciences. Although LLMs have achieved impressive performance in many chemistry tasks, optimal performance requires proper use, including appropriate prompting techniques. Chemistry students are not generally taught strategies for effective LLM usage, especially for nonwriting tasks. Here we report an activity that introduces organic chemistry students to the use of LLMs such as ChatGPT for predicting the outcome of chemical reactions, specifically the types of alkene addition reactions taught in introductory organic chemistry courses. This activity exposes students to molecular representations, digitization of chemical reactions, train-test splitting practices for evaluating performance, and generalizable LLM prompting strategies, namely, the Five “S” prompt-writing approach and in-context learning. We tested this activity with chemistry students in the USA and in Austria and evaluated the activity through anonymous pre- and postlab surveys. Survey data revealed that students felt that they achieved their learning goals and that the activity was enjoyable. As chemistry students will inevitably interact with LLMs in their future careers, it is important to teach best practices for the effective and critical use of these tools in the context of chemistry.

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Publication Details

Journal
Journal of Chemical Education
Published
2026-03-27
DOI
https://doi.org/10.1021/acs.jchemed.5c01712
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
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article

Can You Help ChatGPT Get an “A” in Organic Chemistry? Teaching Effective Prompting of Large Language Models for Reaction Prediction

Elizabeth S. Thrall, Sebastian Tassoti, Julia Schneider, Olivia M. Vanden Assem et al.
Journal of Chemical Education
Machine Learning in Materials Science
article

Can You Help ChatGPT Get an “A” in Organic Chemistry? Teaching Effective Prompting of Large Language Models for Reaction Prediction

Elizabeth S. Thrall, Sebastian Tassoti, Julia Schneider, Olivia M. Vanden Assem, Joshua Schrier
article en

Abstract

As generative artificial intelligence (AI) tools such as large language models (LLMs) become widespread, they are increasingly finding applications in chemical sciences. Although LLMs have achieved impressive performance in many chemistry tasks, optimal performance requires proper use, including appropriate prompting techniques. Chemistry students are not generally taught strategies for effective LLM usage, especially for nonwriting tasks. Here we report an activity that introduces organic chemistry students to the use of LLMs such as ChatGPT for predicting the outcome of chemical reactions, specifically the types of alkene addition reactions taught in introductory organic chemistry courses. This activity exposes students to molecular representations, digitization of chemical reactions, train-test splitting practices for evaluating performance, and generalizable LLM prompting strategies, namely, the Five “S” prompt-writing approach and in-context learning. We tested this activity with chemistry students in the USA and in Austria and evaluated the activity through anonymous pre- and postlab surveys. Survey data revealed that students felt that they achieved their learning goals and that the activity was enjoyable. As chemistry students will inevitably interact with LLMs in their future careers, it is important to teach best practices for the effective and critical use of these tools in the context of chemistry.

Journal of Chemical Education
University of Graz (AT), Fordham University (US), Institute of Chemistry (CN)
Quality Education
Openalex Percentile: Top 7%
Machine Learning in Materials Science
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Can You Help ChatGPT Get an “A” in Organic Chemistry? Teaching Effective Prompting of Large Language Models for Reaction Prediction — Elizabeth S. Thrall, Sebastian Tassoti, et al. · Journal of Chemical Education (2026) | TGRS Research Map | TGRS