AutoGERN: Single-Cell RNA-Seq Gene Regulatory Network Inference via Explicit Link Modeling and Adaptive Architectures

The code and data of AutoGERN are available on GitHub at https://github.com/JChander/AutoGERN and on Zenodo at https://doi.org/10.5281/zenodo.18659807.

Authors

Ya Chen (ORCID: https://orcid.org/0009-0009-5076-1522)
Jiacheng Wang
Ximei Luo
Quan Zou

Institutions

University of Electronic Science and Technology of China (CN)
Quzhou University (CN)

Publication Details

Journal: Bioinformatics
Published: 2026-03-22
DOI: https://doi.org/10.1093/bioinformatics/btag143
Primary Topic: Single-cell and spatial transcriptomics
Type: article
Field-Weighted Citation Impact: 0.00

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article

AutoGERN: Single-Cell RNA-Seq Gene Regulatory Network Inference via Explicit Link Modeling and Adaptive Architectures

Ya Chen, Jiacheng Wang, Ximei Luo, Quan Zou

Mar 22, 2026

Bioinformatics

Single-cell and spatial transcriptomics

article

AutoGERN: Single-Cell RNA-Seq Gene Regulatory Network Inference via Explicit Link Modeling and Adaptive Architectures

Ya Chen, Jiacheng Wang, Ximei Luo, Quan Zou

March 22, 2026article en

Abstract

The code and data of AutoGERN are available on GitHub at https://github.com/JChander/AutoGERN and on Zenodo at https://doi.org/10.5281/zenodo.18659807.

Bioinformatics

University of Electronic Science and Technology of China (CN), Quzhou University (CN)

Openalex Percentile: Top 11%

Single-cell and spatial transcriptomics

DOI Open Access PDF OpenAlex

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AutoGERN: Single-Cell RNA-Seq Gene Regulatory Network Inference via Explicit Link Modeling and Adaptive Architectures — Ya Chen, Jiacheng Wang, et al. · Bioinformatics (2026) | TGRS Research Map | TGRS