Genome-centric metagenomics reveals electroactive syntrophs in a conductive particle-dependent consortium from coastal sediments

Conductive particles are common in coastal sediments, yet their role in shaping methane-producing communities and pathways remains unclear. We applied genome-resolved metagenomics to a sediment-derived consortium serially transferred for a decade and obligately dependent on granular activated carbon (GAC). We discovered a particle-obligate food web composed of electrogenic syntrophic acetate oxidizers (SAO), an electrotrophic methanogen, and necromass recyclers. The primary SAO electrogen, Candidatus Geosyntrophus acetoxidans, represents a new genus and possesses a complete acetate oxidation pathway and extracellular electron-transfer (EET) machinery, including two porin-cytochrome conduits, 43 additional multiheme cytochromes and conductive pili. A secondary SAO, a Lentimicrobium sp. with a giant PCC-cluster, supplies an alternative EET-linked acetate-oxidation route. Electrons from electrogens transfer via GAC to a Methanosarcina equipped with the heptaheme cytochrome MmcA and flagellin for electron uptake. These results provide a genomic blueprint of this particle-obligate environmental consortium and suggest an overlooked acetate-to-methane electron-transfer route in geoconductor-rich anoxic sediments.

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Publication Details

Journal
Nature Communications
Published
2026-03-24
DOI
https://doi.org/10.1038/s41467-026-70468-2
Primary Topic
Microbial Fuel Cells and Bioremediation
Type
article
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article

Genome-centric metagenomics reveals electroactive syntrophs in a conductive particle-dependent consortium from coastal sediments

Nature Communications
Microbial Fuel Cells and Bioremediation
article

Genome-centric metagenomics reveals electroactive syntrophs in a conductive particle-dependent consortium from coastal sediments

article en

Abstract

Conductive particles are common in coastal sediments, yet their role in shaping methane-producing communities and pathways remains unclear. We applied genome-resolved metagenomics to a sediment-derived consortium serially transferred for a decade and obligately dependent on granular activated carbon (GAC). We discovered a particle-obligate food web composed of electrogenic syntrophic acetate oxidizers (SAO), an electrotrophic methanogen, and necromass recyclers. The primary SAO electrogen, Candidatus Geosyntrophus acetoxidans, represents a new genus and possesses a complete acetate oxidation pathway and extracellular electron-transfer (EET) machinery, including two porin-cytochrome conduits, 43 additional multiheme cytochromes and conductive pili. A secondary SAO, a Lentimicrobium sp. with a giant PCC-cluster, supplies an alternative EET-linked acetate-oxidation route. Electrons from electrogens transfer via GAC to a Methanosarcina equipped with the heptaheme cytochrome MmcA and flagellin for electron uptake. These results provide a genomic blueprint of this particle-obligate environmental consortium and suggest an overlooked acetate-to-methane electron-transfer route in geoconductor-rich anoxic sediments.

Nature CommunicationsVol. 17(1)
University of Southern Denmark (DK), Aarhus University (DK)
Life below water
Openalex Percentile: Top 10%
Microbial Fuel Cells and Bioremediation
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Genome-centric metagenomics reveals electroactive syntrophs in a conductive particle-dependent consortium from coastal sediments · Nature Communications (2026) | TGRS Research Map | TGRS