A Cytokine-Related Gene Signature for Pan-Cancer Prognostic Stratification and Malignant Phenotype Characterization

Cytokines are central regulators of inflammation and immune responses within the tumor microenvironment and have been implicated in cancer progression and prognosis. However, the prognostic value of coordinated cytokine-related transcriptional programs across cancer types has not been systematically explored. Pan-cancer transcriptomic and clinical data were analyzed to construct a cytokine-related prognostic signature using least absolute shrinkage and selection operator (LASSO) Cox regression. Patients were stratified into high-risk and low-risk groups based on the derived risk score. Prognostic performance was evaluated in training and test cohorts, and biological relevance was assessed through survival analyses and pathway-level investigations. A 16-gene cytokine-related signature was established that consistently stratified patients into distinct prognostic groups across multiple cancer types. High cytokine-related risk scores were significantly associated with unfavorable survival outcomes and were linked to enhanced cell cycle activity, epithelial-mesenchymal transition, and extracellular matrix remodeling. Integration of the risk score with clinical variables improved individualized survival prediction. Immunohistochemical analyses further confirmed increased protein expression of representative risk-associated genes, including pannexin 1 (PANX1) and FERM domain containing 8 (FRMD8), in multiple tumor tissues compared with corresponding normal tissues. The cytokine-related prognostic signature captures key inflammatory and immune-related programs underlying tumor aggressiveness and provides a robust tool for pan-cancer risk stratification with potential clinical utility.

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Journal
International Journal of Molecular Sciences
Published
2026-03-20
DOI
https://doi.org/10.3390/ijms27062830
Primary Topic
Ferroptosis and cancer prognosis
Type
article
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article

A Cytokine-Related Gene Signature for Pan-Cancer Prognostic Stratification and Malignant Phenotype Characterization

Hui-Pu Liu, Do Thi Minh Xuan, S. C. Chen, C. H. Wu et al.
International Journal of Molecular Sciences
Ferroptosis and cancer prognosis
article

A Cytokine-Related Gene Signature for Pan-Cancer Prognostic Stratification and Malignant Phenotype Characterization

Hui-Pu Liu, Do Thi Minh Xuan, S. C. Chen, C. H. Wu, Junanda Waikhom, Neethu Palekkode, Chung-Hsien Lin, Ayman Fathima, Chien-Cheng Chao, Ching-Chung Ko, Dahlak Daniel Solomon, Hui-Ru Lin, Chien-Han Yuan, Sachin Kumar, Chih-Yang Wang, Yung-Kuo Lee, Kai-Fu Chang, Chih-Hsuan Chang
article en

Abstract

Cytokines are central regulators of inflammation and immune responses within the tumor microenvironment and have been implicated in cancer progression and prognosis. However, the prognostic value of coordinated cytokine-related transcriptional programs across cancer types has not been systematically explored. Pan-cancer transcriptomic and clinical data were analyzed to construct a cytokine-related prognostic signature using least absolute shrinkage and selection operator (LASSO) Cox regression. Patients were stratified into high-risk and low-risk groups based on the derived risk score. Prognostic performance was evaluated in training and test cohorts, and biological relevance was assessed through survival analyses and pathway-level investigations. A 16-gene cytokine-related signature was established that consistently stratified patients into distinct prognostic groups across multiple cancer types. High cytokine-related risk scores were significantly associated with unfavorable survival outcomes and were linked to enhanced cell cycle activity, epithelial-mesenchymal transition, and extracellular matrix remodeling. Integration of the risk score with clinical variables improved individualized survival prediction. Immunohistochemical analyses further confirmed increased protein expression of representative risk-associated genes, including pannexin 1 (PANX1) and FERM domain containing 8 (FRMD8), in multiple tumor tissues compared with corresponding normal tissues. The cytokine-related prognostic signature captures key inflammatory and immune-related programs underlying tumor aggressiveness and provides a robust tool for pan-cancer risk stratification with potential clinical utility.

International Journal of Molecular SciencesVol. 27(6)
Mother Teresa Women's University (IN), National Sun Yat-sen University (TW), Kaohsiung Medical University (TW), Presidency University (IN), Zuoying Armed Forces General Hospital (TW), Kaohsiung Armed Forces General Hospital (TW), Van Lang University (VN), Shoolini University (IN), Chi Mei Medical Center (TW), Taipei Medical University (TW), Chia Nan University of Pharmacy and Science (TW), National Defense Medical Center (TW)
Good health and well-being
Openalex Percentile: Top 14%
Ferroptosis and cancer prognosis
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