Figshare Data Sharing and Reuse User Story: Bridging Scales in Neuroscience

User story showcasing real-world researchers' experiences with data sharing and reuse in the Figshare repository. This article illustrates the impact of the open science lifecycle through the sharing and reuse of a 3D developmental mouse brain atlas. Dr. Yongsoo Kim's lab at Penn State University created the Developmental Common Coordinate Framework (DevCCF) to provide a high-resolution spatial framework for the developing mouse brain, filling a significant gap in neuroinformatics. By openly sharing this complex dataset on Figshare with careful curation and clear metadata, Dr. Kim ensured its accessibility and reproducibility for the broader research community. The value of this transparent sharing was realized when Kaitlin Stouffer and Dr. Michael Miller at Johns Hopkins University reused the DevCCF. They utilized the unique atlas to validate a novel computational method designed to bridge the gap between tissue-scale anatomy and molecular-scale data. Ultimately, this story demonstrates how accessible, well-documented open data fosters interdisciplinary collaboration and accelerates scientific breakthroughs without redundant costs.

Authors

Institutions

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-12-18
DOI
https://doi.org/10.5281/zenodo.19114388
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Figshare Data Sharing and Reuse User Story: Bridging Scales in Neuroscience

Lisa Curtin
Zenodo (CERN European Organization for Nuclear Research)
Cell Image Analysis Techniques
article

Figshare Data Sharing and Reuse User Story: Bridging Scales in Neuroscience

Lisa Curtin
article en

Abstract

User story showcasing real-world researchers' experiences with data sharing and reuse in the Figshare repository. This article illustrates the impact of the open science lifecycle through the sharing and reuse of a 3D developmental mouse brain atlas. Dr. Yongsoo Kim's lab at Penn State University created the Developmental Common Coordinate Framework (DevCCF) to provide a high-resolution spatial framework for the developing mouse brain, filling a significant gap in neuroinformatics. By openly sharing this complex dataset on Figshare with careful curation and clear metadata, Dr. Kim ensured its accessibility and reproducibility for the broader research community. The value of this transparent sharing was realized when Kaitlin Stouffer and Dr. Michael Miller at Johns Hopkins University reused the DevCCF. They utilized the unique atlas to validate a novel computational method designed to bridge the gap between tissue-scale anatomy and molecular-scale data. Ultimately, this story demonstrates how accessible, well-documented open data fosters interdisciplinary collaboration and accelerates scientific breakthroughs without redundant costs.

Zenodo (CERN European Organization for Nuclear Research)
Figshare (United Kingdom) (GB)
Industry, innovation and infrastructure
Openalex Percentile: Top 18%
Cell Image Analysis Techniques
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.