Spatial multi‐omics identifies a NOTCH3‐mediated capillary–mCAF crosstalk driving immune exclusion in hepatocellular carcinoma

Abstract Fibrosis induced immune exclusion is a hepatocellular carcinoma (HCC) hallmark, underscoring the key role of cancer‐associated fibroblasts (CAFs) in immune regulation. Through HCC spatial multi‐omics data and integrating pan‐cancer scRNA‐seq profiles of CAFs under immune checkpoint blockade (ICB) treatment, we characterized a potential crosstalk between capillaries and CAFs mediated by the NOTCH signaling pathway. Specifically, endothelial DLL4‐NOTCH3 signaling appears to be associated with matrix‐producing CAFs (mCAFs) polarization, leading to extracellular matrix remodeling and the establishment of immune‐restrictive niches that hinder T cell infiltration. Perturbation of NOTCH signaling attenuated mCAF differentiation and enhanced T cell infiltration in vitro, and was associated with improved ICB response in both spontaneous and orthotopic HCC mouse models. Collectively, our findings suggest that capillary‐mCAFs communication through the NOTCH pathway, particularly NOTCH3 activation, may contribute to fibrosis‐driven immune exclusion in HCC. Targeting this axis could provide a promising strategy to alleviate stromal barriers and potentiate immunotherapy efficacy.

Authors

Institutions

Publication Details

Journal
iMeta
Published
2026-03-17
DOI
https://doi.org/10.1002/imt2.70117
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Spatial multi‐omics identifies a NOTCH3‐mediated capillary–mCAF crosstalk driving immune exclusion in hepatocellular carcinoma

H. Y. Chen, H. Xia, Yibo Gao, Ying Xiao et al.
iMeta
Single-cell and spatial transcriptomics
article

Spatial multi‐omics identifies a NOTCH3‐mediated capillary–mCAF crosstalk driving immune exclusion in hepatocellular carcinoma

H. Y. Chen, H. Xia, Yibo Gao, Ying Xiao, Boyang Wu, S. Yang, Bo Tang, Haochen Li, Q. Wang, Chuanrui Xu, Xinquan Liu, Jiawei Zhang, Fansen Ji, Xiaojuan Wang, Juan Liu, Tanqing Long, Hao Liu, Jiahong Dong, Huan Li
article en

Abstract

Abstract Fibrosis induced immune exclusion is a hepatocellular carcinoma (HCC) hallmark, underscoring the key role of cancer‐associated fibroblasts (CAFs) in immune regulation. Through HCC spatial multi‐omics data and integrating pan‐cancer scRNA‐seq profiles of CAFs under immune checkpoint blockade (ICB) treatment, we characterized a potential crosstalk between capillaries and CAFs mediated by the NOTCH signaling pathway. Specifically, endothelial DLL4‐NOTCH3 signaling appears to be associated with matrix‐producing CAFs (mCAFs) polarization, leading to extracellular matrix remodeling and the establishment of immune‐restrictive niches that hinder T cell infiltration. Perturbation of NOTCH signaling attenuated mCAF differentiation and enhanced T cell infiltration in vitro, and was associated with improved ICB response in both spontaneous and orthotopic HCC mouse models. Collectively, our findings suggest that capillary‐mCAFs communication through the NOTCH pathway, particularly NOTCH3 activation, may contribute to fibrosis‐driven immune exclusion in HCC. Targeting this axis could provide a promising strategy to alleviate stromal barriers and potentiate immunotherapy efficacy.

iMeta
Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Peking University (CN), Beijing Jishuitan Hospital (CN), National Cancer Center (US), Beijing Tsinghua Chang Gung Hospital (CN), Center for Life Sciences (CN), Huazhong University of Science and Technology (CN), Tsinghua University (CN)
Reduced inequalities
Openalex Percentile: Top 18%
Single-cell and spatial transcriptomics
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.