Heterogeneous responses of soil microbial communities and functions in coastal wetlands to long-term nitrogen deposition

Global nitrogen (N) deposition, a major consequence of climate change, has profound impacts on soil microbes, yet comparative studies investigating the effects of different N types and levels on diverse soil microorganisms and their ecological functions remain scarce. Here, we conducted a 7-year simulated N deposition with multiple levels (Low, Medium, High) and multiple forms (NH<sub>4</sub>NO<sub>3</sub>, NH<sub>4</sub>Cl, KNO<sub>3</sub>), combining amplicon sequencing, QMEC chips and ¹⁵N isotope tracing to analyze their impacts on soil microbial communities of prokaryotes, fungi and Cercozoa, elemental cycling, and N transformation. The results showed that N forms dominated Cercozoa and prokaryote community structures (P < 0.05) but not fungi. High NH₄⁺-N deposition significantly reduced microbial resistance (P < 0.05), while NO₃<sup>-</sup>-N deposition enhanced prokaryote-Cercozoa bipartite network stability and linearly increased community resistance (P < 0.05), supporting the ecological phenomenon of "Interdependence Leading to Enhanced Resilience". Elevated N deposition increased microbial diversity but inhibited key C / N cycling genes (e.g., pmoA, hzsB, nirK2, and nirS1) and N transformation (P < 0.05), raising CH₄ emission and soil N enrichment risks. In conclusion, this study provides scientific support for mitigating N deposition impacts and advancing environmental sustainability.

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Publication Details

Journal
npj Biofilms and Microbiomes
Published
2026-03-17
DOI
https://doi.org/10.1038/s41522-026-00947-3
Primary Topic
Soil Carbon and Nitrogen Dynamics
Type
article
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article

Heterogeneous responses of soil microbial communities and functions in coastal wetlands to long-term nitrogen deposition

Guangshan Wei, Yuqi Zhou, Baohua Xie, Wenchong Shi et al.
npj Biofilms and Microbiomes
Soil Carbon and Nitrogen Dynamics
article

Heterogeneous responses of soil microbial communities and functions in coastal wetlands to long-term nitrogen deposition

Guangshan Wei, Yuqi Zhou, Baohua Xie, Wenchong Shi, Mingcong Li, Guangxuan Han, Zheng Gao, Wenxi Zhou, Mengyue Sun, Ye Deng
article en

Abstract

Global nitrogen (N) deposition, a major consequence of climate change, has profound impacts on soil microbes, yet comparative studies investigating the effects of different N types and levels on diverse soil microorganisms and their ecological functions remain scarce. Here, we conducted a 7-year simulated N deposition with multiple levels (Low, Medium, High) and multiple forms (NH<sub>4</sub>NO<sub>3</sub>, NH<sub>4</sub>Cl, KNO<sub>3</sub>), combining amplicon sequencing, QMEC chips and ¹⁵N isotope tracing to analyze their impacts on soil microbial communities of prokaryotes, fungi and Cercozoa, elemental cycling, and N transformation. The results showed that N forms dominated Cercozoa and prokaryote community structures (P < 0.05) but not fungi. High NH₄⁺-N deposition significantly reduced microbial resistance (P < 0.05), while NO₃<sup>-</sup>-N deposition enhanced prokaryote-Cercozoa bipartite network stability and linearly increased community resistance (P < 0.05), supporting the ecological phenomenon of "Interdependence Leading to Enhanced Resilience". Elevated N deposition increased microbial diversity but inhibited key C / N cycling genes (e.g., pmoA, hzsB, nirK2, and nirS1) and N transformation (P < 0.05), raising CH₄ emission and soil N enrichment risks. In conclusion, this study provides scientific support for mitigating N deposition impacts and advancing environmental sustainability.

npj Biofilms and Microbiomes
Chinese Academy of Sciences (CN), Ministry of Natural Resources (CN), Yantai Institute of Coastal Zone Research (CN), Institute of Wetland Research (CN), Research Center for Eco-Environmental Sciences (CN), Yellow River Institute of Hydraulic Research (CN), Fujian Institute of Oceanography (CN), University of Chinese Academy of Sciences (CN), Shandong Agricultural University (CN), Zhejiang University (CN)
Openalex Percentile: Top 15%
Soil Carbon and Nitrogen Dynamics
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