Cyclization-Based Optimization of the Antimicrobial Peptide YD Yields a Nanomolar Inhibitor of Pulmonary Fibrosis

Pulmonary fibrosis is a common pathological outcome of various lung diseases, and therapeutic options limited. In view of the anti-inflammatory activity of antimicrobial peptides and the role of inflammation in pulmonary fibrosis, herein, we investigated the therapeutic potential of the antimicrobial peptide YD against pulmonary fibrosis for the first time. To improve its druggability, the structure of YD was optimized. Based on alanine scanning and cleavage site mapping, YD was truncated and modified with unnatural amino acids, thereby significantly enhancing its stability. Cyclization further improved its pharmacokinetic profile and in vivo efficacy. The optimized cyclic peptide CYP9 potently inhibited myofibroblast activation, epithelial-mesenchymal transition, and extracellular matrix synthesis at nanomolar concentrations. It exhibited an extended half-life and the ultralow effective dose of 0.02 mg/kg. Mechanistic studies revealed CYP9 effectively inhibits the TGF-β/Smad and MAPK signaling pathway. This study identifies the peptide CYP9 as a promising candidate for treating pulmonary fibrosis.

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Journal
Journal of Medicinal Chemistry
Published
2026-03-13
DOI
https://doi.org/10.1021/acs.jmedchem.6c00277
Primary Topic
Antimicrobial Peptides and Activities
Type
article
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article

Cyclization-Based Optimization of the Antimicrobial Peptide YD Yields a Nanomolar Inhibitor of Pulmonary Fibrosis

Junqiu Xie, Guangjun Bao, XiaoKang Miao, Yin Yin et al.
Journal of Medicinal Chemistry
Antimicrobial Peptides and Activities
article

Cyclization-Based Optimization of the Antimicrobial Peptide YD Yields a Nanomolar Inhibitor of Pulmonary Fibrosis

Junqiu Xie, Guangjun Bao, XiaoKang Miao, Yin Yin, Junpeng Ran, Wenle Yang, Lei Shen, Xiang Zhang, Rui Wang, Ping Su, Jiao Zhang, Lu Cheng
article en

Abstract

Pulmonary fibrosis is a common pathological outcome of various lung diseases, and therapeutic options limited. In view of the anti-inflammatory activity of antimicrobial peptides and the role of inflammation in pulmonary fibrosis, herein, we investigated the therapeutic potential of the antimicrobial peptide YD against pulmonary fibrosis for the first time. To improve its druggability, the structure of YD was optimized. Based on alanine scanning and cleavage site mapping, YD was truncated and modified with unnatural amino acids, thereby significantly enhancing its stability. Cyclization further improved its pharmacokinetic profile and in vivo efficacy. The optimized cyclic peptide CYP9 potently inhibited myofibroblast activation, epithelial-mesenchymal transition, and extracellular matrix synthesis at nanomolar concentrations. It exhibited an extended half-life and the ultralow effective dose of 0.02 mg/kg. Mechanistic studies revealed CYP9 effectively inhibits the TGF-β/Smad and MAPK signaling pathway. This study identifies the peptide CYP9 as a promising candidate for treating pulmonary fibrosis.

Journal of Medicinal ChemistryVol. 69(6)
Academy of Medical Sciences (GB), Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Peking Union Medical College Hospital (CN), Xinjiang Institute of Materia Medica (CN), Shenzhen University Health Science Center (CN), Lanzhou University (CN)
Good health and well-being
Openalex Percentile: Top 23%
Antimicrobial Peptides and Activities
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