Cross-cancer survival prediction using machine learning models

Among the many challenges faced by healthcare systems, cancer remains one of the most urgent. This makes the application of artificial intelligence a critical tool for enhancing early detection and optimizing treatment strategies, especially given the growing volume of patient data being collected. In this study, machine learning models trained on data for a specific type of cancer were employed to predict three-year survival after diagnosis for other cancer types. Two groups were considered: the most frequent cancers and those related to the digestive system. The data were extracted from the Hospital Based Cancer Registries of São Paulo, covering 2000 to 2019, with a consistent selection protocol across all cancer types to enable cross-prediction. XGBoost and LightGBM algorithms were used, choosing the best-performing model for predictions across different topographies. Using a combined dataset of oral cavity, esophageal, and stomach cancers, the model achieved a balanced accuracy of 80.18%, compared with 79.92% for the stomach-specific model. Statistical testing showed no significant difference between these values, suggesting comparable predictive performance. These results illustrate the potential of cross-prediction, especially for rare cancer types where data scarcity represents a significant challenge.

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Publication Details

Journal
Scientific Reports
Published
2026-03-12
DOI
https://doi.org/10.1038/s41598-025-34133-w
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
0.00

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article

Cross-cancer survival prediction using machine learning models

Gisele Aparecida Fernandes, Vanderlei Cunha Parro, Tatiana Natasha Toporcov, Lucas Buk Cardoso et al.
Scientific Reports
AI in cancer detection
article

Cross-cancer survival prediction using machine learning models

Gisele Aparecida Fernandes, Vanderlei Cunha Parro, Tatiana Natasha Toporcov, Lucas Buk Cardoso, María Paula Curado, Adeylson Guimarães Ribeiro, Jones Eduardo Egydio, Nanci Yumi Utida, Bryan Gilvaz Chin
article en

Abstract

Among the many challenges faced by healthcare systems, cancer remains one of the most urgent. This makes the application of artificial intelligence a critical tool for enhancing early detection and optimizing treatment strategies, especially given the growing volume of patient data being collected. In this study, machine learning models trained on data for a specific type of cancer were employed to predict three-year survival after diagnosis for other cancer types. Two groups were considered: the most frequent cancers and those related to the digestive system. The data were extracted from the Hospital Based Cancer Registries of São Paulo, covering 2000 to 2019, with a consistent selection protocol across all cancer types to enable cross-prediction. XGBoost and LightGBM algorithms were used, choosing the best-performing model for predictions across different topographies. Using a combined dataset of oral cavity, esophageal, and stomach cancers, the model achieved a balanced accuracy of 80.18%, compared with 79.92% for the stomach-specific model. Statistical testing showed no significant difference between these values, suggesting comparable predictive performance. These results illustrate the potential of cross-prediction, especially for rare cancer types where data scarcity represents a significant challenge.

Scientific ReportsVol. 16(1)
Instituto Mauá de Tecnologia (BR), AC Camargo Hospital (BR), Instituto de Saúde (BR), Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (BR)
Fundação de Amparo à Pesquisa do Estado de São Paulo
Good health and well-being
Openalex Percentile: Top 28%
AI in cancer detection
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