Discrimination of Threonine Isomers by Multiple-Stage Tandem Mass Spectrometry with Collision-Induced Dissociation

Fragmentation of protonated threonine isomers was investigated by multiple-stage tandem mass spectrometry (MS<i><sup>n</sup></i>) with ion-trap collision-induced dissociation (CID) and density functional theory (DFT) calculations. Protonated molecules containing oxygen or nitrogen often produce heterocyclic fragments by CID. DFT calculations revealed that H<sub>2</sub>O loss from threonine isomers produced cyclic amines, lactams, and lactones. The transition-state barriers and rate constant for the formation of these fragments are highly dependent on the ring size. Although 3-membered cyclic amines are observed in the product ion spectrum, lactams and lactones are formed only as rings larger than four and five members, respectively. H<sub>2</sub>O loss from the protonated threonine side chain produced a 3-membered cyclic amine containing a carboxyl group, which undergoes loss of the combined elements of H<sub>2</sub>O and CO upon CID. H<sub>2</sub>O loss from protonated homoserine and β-homoserine produced 5-membered lactone and 4-membered lactam, respectively. Further dissociation of the corresponding lactone and lactam results in fragment ions formed via the loss of CO and CH<sub>2</sub>CO, respectively. In contrast, H<sub>2</sub>O loss from the protonated γ-amino-β-hydroxybutyric acid provides 5-membered lactams, which undergo only further H<sub>2</sub>O loss upon CID. MS<sup>3</sup> analysis of protonated threonine isomers through dehydrated precursor ions produced different fragment ions. The threonine isomers could be distinguished by characteristic fragment ions, and the molar ratio of the isomers in the mixture can be estimated from the relative abundances of their fragment ions. These results demonstrate MS<i><sup>n</sup></i> with ion-trap CID to be a useful method for the identification and semiquantification of threonine isomers.

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Journal
Journal of the American Society for Mass Spectrometry
Published
2026-03-12
DOI
https://doi.org/10.1021/jasms.6c00013
Primary Topic
Mass Spectrometry Techniques and Applications
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article
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article

Discrimination of Threonine Isomers by Multiple-Stage Tandem Mass Spectrometry with Collision-Induced Dissociation

Daiki Asakawa
Journal of the American Society for Mass Spectrometry
Mass Spectrometry Techniques and Applications
article

Discrimination of Threonine Isomers by Multiple-Stage Tandem Mass Spectrometry with Collision-Induced Dissociation

Daiki Asakawa
article en

Abstract

Fragmentation of protonated threonine isomers was investigated by multiple-stage tandem mass spectrometry (MS<i><sup>n</sup></i>) with ion-trap collision-induced dissociation (CID) and density functional theory (DFT) calculations. Protonated molecules containing oxygen or nitrogen often produce heterocyclic fragments by CID. DFT calculations revealed that H<sub>2</sub>O loss from threonine isomers produced cyclic amines, lactams, and lactones. The transition-state barriers and rate constant for the formation of these fragments are highly dependent on the ring size. Although 3-membered cyclic amines are observed in the product ion spectrum, lactams and lactones are formed only as rings larger than four and five members, respectively. H<sub>2</sub>O loss from the protonated threonine side chain produced a 3-membered cyclic amine containing a carboxyl group, which undergoes loss of the combined elements of H<sub>2</sub>O and CO upon CID. H<sub>2</sub>O loss from protonated homoserine and β-homoserine produced 5-membered lactone and 4-membered lactam, respectively. Further dissociation of the corresponding lactone and lactam results in fragment ions formed via the loss of CO and CH<sub>2</sub>CO, respectively. In contrast, H<sub>2</sub>O loss from the protonated γ-amino-β-hydroxybutyric acid provides 5-membered lactams, which undergo only further H<sub>2</sub>O loss upon CID. MS<sup>3</sup> analysis of protonated threonine isomers through dehydrated precursor ions produced different fragment ions. The threonine isomers could be distinguished by characteristic fragment ions, and the molar ratio of the isomers in the mixture can be estimated from the relative abundances of their fragment ions. These results demonstrate MS<i><sup>n</sup></i> with ion-trap CID to be a useful method for the identification and semiquantification of threonine isomers.

Journal of the American Society for Mass Spectrometry
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Mass Spectrometry Techniques and Applications
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