Chromosomal-level genome assembly of Ichthyurus bourgeoisi Gestro using PacBio HiFi and Hi-C sequencing

Ichthyurus bourgeoisi Gestro is a representative species of the tribe Ichthyurini within the beetle family Cantharidae. This tribe is particularly noteworthy because of its brachelytrous characteristics. However, the lack of high-quality genomic resources hinders our understanding of the evolution and ecological adaptions associated with this beetle group. In this study, we present a chromosome-level genome assembly for I. bourgeoisi constructed using a combination of PacBio HiFi and Hi-C sequencing data. The genome spans 664.72 Mb, with a scaffold N50 of 98.12 Mb, and is organized into seven pseudo-chromosomes, including a chromosome X validated through analyses of genome collinearity and sequencing depth. Repeat sequences account for 65.35% of the genome, and 13,386 protein-coding genes are identified. The high-quality genome assembly and annotation has been corroborated by multiple metrics, including genome size, reads mapping rate, and BUSCO completeness (98.6%). This comprehensive genomic resource provides a foundation for elucidating the ecological adaption of I. bourgeoisi and advancing our understanding of morphological evolution in Ichthyurini within Cantharidae.

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Journal
Scientific Data
Published
2026-03-11
DOI
https://doi.org/10.1038/s41597-026-07039-z
Primary Topic
Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
Type
article
Field-Weighted Citation Impact
0.00

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article

Chromosomal-level genome assembly of Ichthyurus bourgeoisi Gestro using PacBio HiFi and Hi-C sequencing

Yuxia Yang, Yiyang Zhen, Zheng Yang, Jianxin Hua et al.
Scientific Data
Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
article

Chromosomal-level genome assembly of Ichthyurus bourgeoisi Gestro using PacBio HiFi and Hi-C sequencing

Yuxia Yang, Yiyang Zhen, Zheng Yang, Jianxin Hua, Haoyu Liu, Jiliang Wang
article en

Abstract

Ichthyurus bourgeoisi Gestro is a representative species of the tribe Ichthyurini within the beetle family Cantharidae. This tribe is particularly noteworthy because of its brachelytrous characteristics. However, the lack of high-quality genomic resources hinders our understanding of the evolution and ecological adaptions associated with this beetle group. In this study, we present a chromosome-level genome assembly for I. bourgeoisi constructed using a combination of PacBio HiFi and Hi-C sequencing data. The genome spans 664.72 Mb, with a scaffold N50 of 98.12 Mb, and is organized into seven pseudo-chromosomes, including a chromosome X validated through analyses of genome collinearity and sequencing depth. Repeat sequences account for 65.35% of the genome, and 13,386 protein-coding genes are identified. The high-quality genome assembly and annotation has been corroborated by multiple metrics, including genome size, reads mapping rate, and BUSCO completeness (98.6%). This comprehensive genomic resource provides a foundation for elucidating the ecological adaption of I. bourgeoisi and advancing our understanding of morphological evolution in Ichthyurini within Cantharidae.

Scientific Data
Shijiazhuang Academy of Agriculture and Forestry Sciences (CN), Hebei University (CN)
National Natural Science Foundation of China, Hebei University
Openalex Percentile: Top 26%
Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
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