Description of Sphingobium wonjuense sp. nov. isolated from mountain soil and Sphingobium erigeronicola sp. nov. isolated from plant root
Two novel bacterial strains designated CR2-8<sup>T</sup> and HWE2-09<sup>T</sup> were isolated from mountain soil and plant root, respectively, and characterized using a polyphasic taxonomic approach. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain CR2-8<sup>T</sup> shared the highest sequence similarity with <i>Sphingobium limneticum</i> 301<sup>T</sup> (98.0%), and HWE2-09<sup>T</sup> with <i>Sphingobium rhizovicinum</i> CC-FH12-1<sup>T</sup> (97.8%). The genome-based comparison indicated that both CR2-8<sup>T</sup> and HWE2-09<sup>T</sup> shared the highest relatedness with <i>Sphingobium cupriresistens</i> CU4<sup>T</sup>, sharing 84.05% and 84.7 % orthologous average nucleotide identity and 29.3% and 30.3 % digital DNA-DNA hybridization, respectively, all of which were clearly below the suggested cutoffs for species distinction. For both strains, the major fatty acids were two summed features, one consisting of C<sub>16 : 1</sub> ω7c and/or C<sub>16 : 1</sub> ω6c and the other consisting of C<sub>18 : 1</sub> ω7c and/or C<sub>18 : 1</sub> ω6c, and also C<sub>14 : 0</sub> 2OH and C<sub>16 : 0</sub>. The major ubiquinone was Q-10, and the main polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and phosphatidyldimethylethanolamine for both strains. The DNA G+C content of strain CR2-8<sup>T</sup> was 63.16 %, and that of strain HWE2-09<sup>T</sup> was 63.26 %. The phenotypic, chemotaxonomic and phylogenetic analyses indicate that each of the strains CR2-8<sup>T</sup> and HWE2-09<sup>T</sup> should be classified as a new species of <i>Sphingobium</i>, for which the names <i>Sphingobium wonjuense</i> sp. nov. (type strain=CR2-8<sup>T</sup>=KCTC 8939<sup>T</sup>=JCM 36935<sup>T</sup>) and <i>Sphingobium erigeronicola</i> sp. nov. (type strain=HWE2-09<sup>T</sup>=KCTC 8940<sup>T</sup>=JCM 36936<sup>T</sup>) are proposed.
Authors
- Seung Bum Kim (ORCID: https://orcid.org/0000-0003-2279-5759)
- Chae Rin Jeong
Institutions
- Chungnam National University (KR)
Publication Details
- Journal
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Published
- 2026-03-09
- DOI
- https://doi.org/10.1099/ijsem.0.007100
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00