Study on the Diversity of Flower Color Phenotypes in Paeonia delavayi

Paeonia delavayi displays exceptionally diverse flower colors. This study established a quantitative classification system for these colors and analyzed the relationships among pigment composition, content, and geographical distribution, providing a scientific basis for genetic diversity conservation and ornamental peony breeding. Petals from 465 plants across 30 wild populations and nurseries in central and northwestern Yunnan, China, were analyzed. Color values were quantified using CIE-Lab and Munsell color systems, while pigment content was determined using HPLC and spectrophotometry. Correlations between color values, pigments, and environmental factors were examined. The results were as follows: (1) Flower colors were classified into nine color series, each with distinct boundaries in the color value space: white (W), yellow (Y), yellow-green (YG), orange (O), orange-brown (OB), pink (P), red (R), purple-red (PR), and dark purple (DP). (2) Color values showed wide variation (a*: −23.10–65.54; b*: −4.11–94.26), indicating high diversity. (3) Yellow-category petals had high b* values (24.91–94.26), correlated with carotenoid, chlorophyll, and flavonoid content, and lacked anthocyanins. The lightness value (L*) of red-category petals was correlated with total flavonoid (TF) and total anthocyanin (ACN) content. (4) Correlation analysis showed that the formation of dark-flower colors (DP, PR, R) was significantly and positively correlated with high altitude, high soil organic carbon (SOC), and high soil total nitrogen (STN) content. The distribution of yellow-series flower colors (Y, YG) was correlated with lower altitude and weaker UV radiation, while increasing mean annual temperature (MAT) limited their distribution. (5) Analysis incorporating environmental factors showed that high-altitude areas in northwestern Yunnan, such as Shangri-La and Lijiang, had the richest flower color diversity, whereas central Yunnan’s low-altitude areas were dominated by yellow flower colors. This study indicates that the high-altitude areas of northwestern Yunnan represent the region with the richest flower color diversity in P. delavayi, and are important for the conservation of its flower color genetic diversity and as a source of genetic diversity in flower color in ornamental cultivar breeding.