Admissibility and Persistence in Metabolic Systems: A Tier‑7 Instantiation within the Paton System

Biological metabolism consists of interconnected biochemical reactions that transform energy and matter within living systems. Traditional metabolic analysis focuses on reaction kinetics, thermodynamic feasibility, and biochemical regulation. This paper introduces a structural interpretation based on the Paton System. Within this framework, metabolic persistence depends on the admissibility of biochemical states and the reachability of reaction pathways under thermodynamic and enzymatic constraints. A metabolic system continues to function only while at least one admissible continuation path remains available through the reaction network. When admissible coordination collapses, metabolic systems transition toward failure states such as substrate depletion, pathway interruption, or systemic metabolic breakdown. This interpretation reframes metabolic stability as a structural admissibility problem rather than solely a biochemical optimisation problem. The result provides a domain-neutral structural account of metabolic persistence consistent with previously established Paton System principles and extends the framework’s Tier-7 domain instantiations into biological metabolism.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-03-08
DOI
https://doi.org/10.5281/zenodo.18907119
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
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article

Admissibility and Persistence in Metabolic Systems: A Tier‑7 Instantiation within the Paton System

Andrew John Paton
Zenodo (CERN European Organization for Nuclear Research)
Microbial Metabolic Engineering and Bioproduction
article

Admissibility and Persistence in Metabolic Systems: A Tier‑7 Instantiation within the Paton System

Andrew John Paton
article en

Abstract

Biological metabolism consists of interconnected biochemical reactions that transform energy and matter within living systems. Traditional metabolic analysis focuses on reaction kinetics, thermodynamic feasibility, and biochemical regulation. This paper introduces a structural interpretation based on the Paton System. Within this framework, metabolic persistence depends on the admissibility of biochemical states and the reachability of reaction pathways under thermodynamic and enzymatic constraints. A metabolic system continues to function only while at least one admissible continuation path remains available through the reaction network. When admissible coordination collapses, metabolic systems transition toward failure states such as substrate depletion, pathway interruption, or systemic metabolic breakdown. This interpretation reframes metabolic stability as a structural admissibility problem rather than solely a biochemical optimisation problem. The result provides a domain-neutral structural account of metabolic persistence consistent with previously established Paton System principles and extends the framework’s Tier-7 domain instantiations into biological metabolism.

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 30%
Microbial Metabolic Engineering and Bioproduction
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Admissibility and Persistence in Metabolic Systems: A Tier‑7 Instantiation within the Paton System — Andrew John Paton · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS