BigEye: a clinically interpretable deep learning framework for diabetic retinopathy detection and stage prediction

Diabetic Retinopathy (DR) is a major cause of vision loss and blindness in diabetic individuals. DR is conventionally diagnosed by assessing retinal lesion findings from fundus photographs taken during exams and applying a scale like International Classification of Diabetic Retinopathy (ICDR). The expected rise in future DR cases highlights the need for deep learning models capable of identifying relevant lesions and delivering explainable results. To this end we present BigEye, a novel framework that uses extracted lesion features to predict ICDR stage. A dataset of fundus images from a local hospital and a public dataset, annotated with segmentation masks and DR stages, is assembled to train a DeepLabV3 + model on six retinal lesions. Lesion quantities and pixel area features are integrated by a classifier model evaluated through 10-fold nested cross validation (0.77 ± 0.07 precision, 0.71 ± 0.06 recall, 0.72 ± 0.07 F1 score, 0.95 ± 0.02 ROC-AUC, 0.83 ± 0.03 accuracy). A Shapely Additive Explanations (SHAP) value analysis notably shows close alignment between discriminative lesions for each DR stage and corresponding ICDR stage criteria. These results demonstrate that BigEye is well suited for providing explainable ICDR stage predictions grounded in clinical knowledge.

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Publication Details

Journal
Scientific Reports
Published
2026-03-08
DOI
https://doi.org/10.1038/s41598-026-43573-x
Primary Topic
Retinal Imaging and Analysis
Type
article
Field-Weighted Citation Impact
0.00

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BigEye: a clinically interpretable deep learning framework for diabetic retinopathy detection and stage prediction

Doaa Hassan Salem, Hunter Mathias Gill, Amir Reza Hajrasouliha, Okiemute Beatrice Omoru et al.
Scientific Reports
Retinal Imaging and Analysis
article

BigEye: a clinically interpretable deep learning framework for diabetic retinopathy detection and stage prediction

Doaa Hassan Salem, Hunter Mathias Gill, Amir Reza Hajrasouliha, Okiemute Beatrice Omoru, Sarath Chandra Janga, Michael Happe, Frank Dash Bogan, Jeffrey Xiao Liu
article en

Abstract

Diabetic Retinopathy (DR) is a major cause of vision loss and blindness in diabetic individuals. DR is conventionally diagnosed by assessing retinal lesion findings from fundus photographs taken during exams and applying a scale like International Classification of Diabetic Retinopathy (ICDR). The expected rise in future DR cases highlights the need for deep learning models capable of identifying relevant lesions and delivering explainable results. To this end we present BigEye, a novel framework that uses extracted lesion features to predict ICDR stage. A dataset of fundus images from a local hospital and a public dataset, annotated with segmentation masks and DR stages, is assembled to train a DeepLabV3 + model on six retinal lesions. Lesion quantities and pixel area features are integrated by a classifier model evaluated through 10-fold nested cross validation (0.77 ± 0.07 precision, 0.71 ± 0.06 recall, 0.72 ± 0.07 F1 score, 0.95 ± 0.02 ROC-AUC, 0.83 ± 0.03 accuracy). A Shapely Additive Explanations (SHAP) value analysis notably shows close alignment between discriminative lesions for each DR stage and corresponding ICDR stage criteria. These results demonstrate that BigEye is well suited for providing explainable ICDR stage predictions grounded in clinical knowledge.

Scientific Reports
Indiana University Health (US), Midwest Eye Institute (US), National Telecommunications Institute (EG), Indiana University – Purdue University Indianapolis (US)
Eli Lilly and Company, Lilly Endowment, Indiana University Health, National Institutes of Health, National Eye Institute
Reduced inequalities
Openalex Percentile: Top 31%
Retinal Imaging and Analysis
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