A high-quality chromosome-level genome assembly of a feather star Glyptometra sp. from a deep seamount

Feather stars are an important group for studying the evolution and environmental adaptability. However, the absence of a high-quality feather star genome from deep sea has hindered a thorough understanding of their adaptive evolution. In this study, we reported the first chromosome-level genome assembly of Glyptometra sp. from a deep seamount, Zhenbei seamount, in South China Sea. The Glyptometra sp. CNS01629 genome assembly has a total length of 1.14 Gb with a contig N50 length of 19.0 Mb and a scaffold N50 length of 84.75 Mb, encompassing 13 chromosomes, highlighting high genome continuity. Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment yielded a completeness estimate of 98.1% for this assembly. We predicted a total of 20,814 protein coding genes (PCGs), with 20,309 functionally annotated. The availability of this high-quality chromosome-level genome of Glyptometra sp. CNS01629 contributes to our understanding of the origin and evolution of crinoids.

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Publication Details

Journal
Scientific Data
Published
2026-03-05
DOI
https://doi.org/10.1038/s41597-026-06982-1
Primary Topic
Echinoderm biology and ecology
Type
article
Field-Weighted Citation Impact
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article

A high-quality chromosome-level genome assembly of a feather star Glyptometra sp. from a deep seamount

Zijie Mei, Jianjun Wang, Shangqi Sun, Zhongli Sha et al.
Scientific Data
Echinoderm biology and ecology
article

A high-quality chromosome-level genome assembly of a feather star Glyptometra sp. from a deep seamount

Zijie Mei, Jianjun Wang, Shangqi Sun, Zhongli Sha, Nansheng Chen
article en

Abstract

Feather stars are an important group for studying the evolution and environmental adaptability. However, the absence of a high-quality feather star genome from deep sea has hindered a thorough understanding of their adaptive evolution. In this study, we reported the first chromosome-level genome assembly of Glyptometra sp. from a deep seamount, Zhenbei seamount, in South China Sea. The Glyptometra sp. CNS01629 genome assembly has a total length of 1.14 Gb with a contig N50 length of 19.0 Mb and a scaffold N50 length of 84.75 Mb, encompassing 13 chromosomes, highlighting high genome continuity. Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment yielded a completeness estimate of 98.1% for this assembly. We predicted a total of 20,814 protein coding genes (PCGs), with 20,309 functionally annotated. The availability of this high-quality chromosome-level genome of Glyptometra sp. CNS01629 contributes to our understanding of the origin and evolution of crinoids.

Scientific Data
Chinese Academy of Sciences (CN), Institute of Oceanology (CN), Qingdao National Laboratory for Marine Science and Technology (CN), University of Chinese Academy of Sciences (CN), Laoshan Laboratory
Life below water
Openalex Percentile: Top 40%
Echinoderm biology and ecology
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