Chemical Probes for Functional Plant Imaging

The advent of spatial and quantitative biology has led to immense advances in understanding the complex inner workings of plants, down to the molecular scale. Functional imaging of live plants, which enables the spatial and quantitative mapping of biochemical cues, physicochemical properties of cellular structures, and the dynamics of physical and chemical signals with unprecedented resolution, has become a key technology for advancing the mechanistic understanding of plant cell biology. In this review, we highlight progress in live functional imaging in plants through the use and development of chemical fluorescent probes, which enable plant functional imaging without requiring genetic manipulation of the study object. We explain how probes sense, target, and report on functional features within the plant cell; discuss their limitations, including toxicity; and provide case studies to exemplify how these tools can complement biological studies to unravel the complex machinery that makes plants work. We conclude by outlining the expected future development of this field and identifying key challenges that lie ahead.

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Publication Details

Journal
Annual Review of Plant Biology
Published
2026-03-03
DOI
https://doi.org/10.1146/annurev-arplant-063025-115246
Primary Topic
Molecular Sensors and Ion Detection
Type
article
Field-Weighted Citation Impact
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article

Chemical Probes for Functional Plant Imaging

Joris Sprakel, Jan Willem Borst, Maarten Besten, Matyáš Fendrych et al.
Annual Review of Plant Biology
Molecular Sensors and Ion Detection
article

Chemical Probes for Functional Plant Imaging

Joris Sprakel, Jan Willem Borst, Maarten Besten, Matyáš Fendrych, Anna Daamen
article en

Abstract

The advent of spatial and quantitative biology has led to immense advances in understanding the complex inner workings of plants, down to the molecular scale. Functional imaging of live plants, which enables the spatial and quantitative mapping of biochemical cues, physicochemical properties of cellular structures, and the dynamics of physical and chemical signals with unprecedented resolution, has become a key technology for advancing the mechanistic understanding of plant cell biology. In this review, we highlight progress in live functional imaging in plants through the use and development of chemical fluorescent probes, which enable plant functional imaging without requiring genetic manipulation of the study object. We explain how probes sense, target, and report on functional features within the plant cell; discuss their limitations, including toxicity; and provide case studies to exemplify how these tools can complement biological studies to unravel the complex machinery that makes plants work. We conclude by outlining the expected future development of this field and identifying key challenges that lie ahead.

Annual Review of Plant Biology
Charles University (CZ), Czech Academy of Sciences, Institute of Experimental Botany (CZ), Wageningen University & Research (NL)
Openalex Percentile: Top 38%
Molecular Sensors and Ion Detection
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Chemical Probes for Functional Plant Imaging — Joris Sprakel, Jan Willem Borst, et al. · Annual Review of Plant Biology (2026) | TGRS Research Map | TGRS