Organization and evolution of sex-biased gene expression in <i>Drosophila</i> adult sexual circuits

Sexually dimorphic behaviors are widespread across animals. A key open question is how the underlying sexual circuits, which encode these behaviors, evolve to meet sex-specific fitness needs despite being built from largely shared developmental blueprints. Here, we use single-cell transcriptomics, leveraging the sex determination gene <i>fruitless</i> (<i>fru</i>) as a molecular handle, to examine the transcriptomic landscape and evolution of adult <i>Drosophila</i> sexual circuits at cellular resolution. We find that sex-biased gene expression is limited, highly cell-type-specific, and largely species-specific. Species divergence in gene expression is widespread and predominantly coupled between sexes, with sex-specific changes constrained by pleiotropic gene expression across cell types. Furthermore, a strong overlap of differentially expressed genes across sexes, species, and <i>fru</i> status points to a common set of genes, particularly neural signaling genes, whose expressions are highly labile across multiple contexts. Finally, transcriptomic divergence between sexes decreases from mid-pupae to adulthood, underscoring the developmentally dynamic nature of sex-biased gene expression. Our results provide fundamental insights into the organization and evolutionary mode of sex-biased gene expression, suggesting that sex-specific adaptation via selective gene programs at localized circuit nodes is a key mechanism that preserves circuit evolvability despite pervasive transcriptomic coupling between sexes.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-03-03
DOI
https://doi.org/10.64898/2026.02.28.708756
Primary Topic
Developmental Biology and Gene Regulation
Type
article
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article

Organization and evolution of sex-biased gene expression in Drosophila adult sexual circuits

Harold Gifford, Yerbol Z. Kurmangaliyev, Yun Ding
bioRxiv (Cold Spring Harbor Laboratory)
Developmental Biology and Gene Regulation
article

Organization and evolution of sex-biased gene expression in Drosophila adult sexual circuits

Harold Gifford, Yerbol Z. Kurmangaliyev, Yun Ding
article en

Abstract

Sexually dimorphic behaviors are widespread across animals. A key open question is how the underlying sexual circuits, which encode these behaviors, evolve to meet sex-specific fitness needs despite being built from largely shared developmental blueprints. Here, we use single-cell transcriptomics, leveraging the sex determination gene <i>fruitless</i> (<i>fru</i>) as a molecular handle, to examine the transcriptomic landscape and evolution of adult <i>Drosophila</i> sexual circuits at cellular resolution. We find that sex-biased gene expression is limited, highly cell-type-specific, and largely species-specific. Species divergence in gene expression is widespread and predominantly coupled between sexes, with sex-specific changes constrained by pleiotropic gene expression across cell types. Furthermore, a strong overlap of differentially expressed genes across sexes, species, and <i>fru</i> status points to a common set of genes, particularly neural signaling genes, whose expressions are highly labile across multiple contexts. Finally, transcriptomic divergence between sexes decreases from mid-pupae to adulthood, underscoring the developmentally dynamic nature of sex-biased gene expression. Our results provide fundamental insights into the organization and evolutionary mode of sex-biased gene expression, suggesting that sex-specific adaptation via selective gene programs at localized circuit nodes is a key mechanism that preserves circuit evolvability despite pervasive transcriptomic coupling between sexes.

bioRxiv (Cold Spring Harbor Laboratory)
Brandeis University (US), University of Pennsylvania (US)
Openalex Percentile: Top 36%
Developmental Biology and Gene Regulation
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Organization and evolution of sex-biased gene expression in <i>Drosophila</i> adult sexual circuits — Harold Gifford, Yerbol Z. Kurmangaliyev, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS