On the Role of DNA in CaCO3 Biomineralization: Influence on the Kinetics, Mesoscale Structure, and Morphology of Biogenic Minerals

The role of extracellular DNA in calcium carbonate biomineralization processes is studied using the bacterial culture Bacillus cereus 4B. Different types of DNA, including lysed cell, plasmid, and eukaryotic genomic DNA, are found to significantly affect the kinetics and morphology of calcium carbonate mineral formation. In bacterial systems with varying calcium concentrations, adding cell lysate is shown to accelerate calcium carbonate precipitation and affect the mesoscale structure of aggregates. In an abiogenic system, the addition of plasmid DNA slightly increases the gyration radius of fractal clusters in the crystalline precipitate (from 10.5 to 11.4 nm) and decreases their fractal dimension compared to a system without DNA (from 2.35 to 2.1), while genomic DNA increases it to 2.8. Structural differences in the precipitated minerals suggest that DNA is not only a trigger for biomineralization but also a template for the synthesis of CaCO3 biominerals. This study demonstrates that the molecular characteristics of DNA play a key role in the nucleation, growth, and morphology of mineral structures, opening new perspectives for understanding biomineralization mechanisms.

Authors

Institutions

Publication Details

Journal
Nanobiotechnology Reports
Published
2025-12-01
DOI
https://doi.org/10.1134/s2635167625601950
Primary Topic
Microbial Applications in Construction Materials
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

On the Role of DNA in CaCO3 Biomineralization: Influence on the Kinetics, Mesoscale Structure, and Morphology of Biogenic Minerals

Yu. E. Gorshkova, D. V. Lebedev, N. A. Verlov, A. A. Kulminskaya et al.
Nanobiotechnology Reports
Microbial Applications in Construction Materials
article

On the Role of DNA in CaCO3 Biomineralization: Influence on the Kinetics, Mesoscale Structure, and Morphology of Biogenic Minerals

Yu. E. Gorshkova, D. V. Lebedev, N. A. Verlov, A. A. Kulminskaya, A. E. Baranchikov, L. A. Ivanova
article en

Abstract

The role of extracellular DNA in calcium carbonate biomineralization processes is studied using the bacterial culture Bacillus cereus 4B. Different types of DNA, including lysed cell, plasmid, and eukaryotic genomic DNA, are found to significantly affect the kinetics and morphology of calcium carbonate mineral formation. In bacterial systems with varying calcium concentrations, adding cell lysate is shown to accelerate calcium carbonate precipitation and affect the mesoscale structure of aggregates. In an abiogenic system, the addition of plasmid DNA slightly increases the gyration radius of fractal clusters in the crystalline precipitate (from 10.5 to 11.4 nm) and decreases their fractal dimension compared to a system without DNA (from 2.35 to 2.1), while genomic DNA increases it to 2.8. Structural differences in the precipitated minerals suggest that DNA is not only a trigger for biomineralization but also a template for the synthesis of CaCO3 biominerals. This study demonstrates that the molecular characteristics of DNA play a key role in the nucleation, growth, and morphology of mineral structures, opening new perspectives for understanding biomineralization mechanisms.

Nanobiotechnology ReportsVol. 20(6)
Joint Institute for Nuclear Research (RU), NS Kurnakova Institute of General and Inorganic Chemistry (RU), Petersburg Nuclear Physics Institute (RU)
Openalex Percentile: Top 35%
Microbial Applications in Construction Materials
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.