Isolation, optimization, and bioactivity evaluation of <i>Streptomyces qinglanensis</i> VITABS23 from mangrove sediments: an in vitro and in silico study

Mangroves are valuable ecosystems that harbor unique actinobacteria capable of producing bioactive compounds of therapeutic importance. In the present study, a total of 26 marine actinobacteria were isolated using actinomycetes isolation agar and starch casein agar and were preliminarily identified as <i>Streptomyces</i> sp. based on colony morphology. Screening of cell-free extracts revealed that four isolates (ABS13, ABS15, ABS19 and ABS23) exhibited antibacterial activity against the tested bacterial pathogens, with isolate ABS23 showing the highest activity, producing inhibition zones of 25.0 ± 0.0 mm against <i>Pseudomonas aeruginosa</i> and <i>Bacillus cereus</i>. The extract of ABS23 also demonstrated strong antioxidant potential, as indicated by 2,2-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging (88.5 ± 0.52%) and metal chelating activity (57.38 ± 0.27%). Media optimization studies showed that sucrose and casein were the most effective carbon and nitrogen sources for enhanced metabolite production. GC-MS analysis revealed the presence of several bioactive compounds, including heterocyclic compounds, esters and pyrrolopyrazines. <i>In silico</i> analysis using SwissADME and pKCSM predicted favorable drug-likeness and pharmacokinetic properties of the identified metabolites. Furthermore, the potential isolate was identified as <i>Streptomyces qinglanensis</i> VITABS23 by 16S rRNA sequencing. Overall, this study highlights actinobacteria derived from mangrove sediments are potential sources of lead compounds for pharmaceutical applications.

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Journal
Preparative Biochemistry & Biotechnology
Published
2026-02-25
DOI
https://doi.org/10.1080/10826068.2026.2635141
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
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article

Isolation, optimization, and bioactivity evaluation of Streptomyces qinglanensis VITABS23 from mangrove sediments: an in vitro and in silico study

Apsara S. Babu, K V Bhaskara Rao
Preparative Biochemistry & Biotechnology
Microbial Natural Products and Biosynthesis
article

Isolation, optimization, and bioactivity evaluation of Streptomyces qinglanensis VITABS23 from mangrove sediments: an in vitro and in silico study

Apsara S. Babu, K V Bhaskara Rao
article en

Abstract

Mangroves are valuable ecosystems that harbor unique actinobacteria capable of producing bioactive compounds of therapeutic importance. In the present study, a total of 26 marine actinobacteria were isolated using actinomycetes isolation agar and starch casein agar and were preliminarily identified as <i>Streptomyces</i> sp. based on colony morphology. Screening of cell-free extracts revealed that four isolates (ABS13, ABS15, ABS19 and ABS23) exhibited antibacterial activity against the tested bacterial pathogens, with isolate ABS23 showing the highest activity, producing inhibition zones of 25.0 ± 0.0 mm against <i>Pseudomonas aeruginosa</i> and <i>Bacillus cereus</i>. The extract of ABS23 also demonstrated strong antioxidant potential, as indicated by 2,2-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging (88.5 ± 0.52%) and metal chelating activity (57.38 ± 0.27%). Media optimization studies showed that sucrose and casein were the most effective carbon and nitrogen sources for enhanced metabolite production. GC-MS analysis revealed the presence of several bioactive compounds, including heterocyclic compounds, esters and pyrrolopyrazines. <i>In silico</i> analysis using SwissADME and pKCSM predicted favorable drug-likeness and pharmacokinetic properties of the identified metabolites. Furthermore, the potential isolate was identified as <i>Streptomyces qinglanensis</i> VITABS23 by 16S rRNA sequencing. Overall, this study highlights actinobacteria derived from mangrove sediments are potential sources of lead compounds for pharmaceutical applications.

Preparative Biochemistry & Biotechnology
Vellore Institute of Technology University (IN)
Life below water
Openalex Percentile: Top 40%
Microbial Natural Products and Biosynthesis
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