Full-length haplotype reconstruction of CD36 by long-read sequencing: uncovers a novel structural variant

This study establishes a robust PolySeq nanopore sequencing-based framework for full-length CD36 haplotype reconstruction and identifies a large structural deletion as a major, previously underrecognized candidate genetic mechanism underlying type I CD36 deficiency. Our findings suggest that many unresolved cases of type I deficiency may be attributable to cryptic structural variants missed by conventional methods, highlighting the necessity of long-read sequencing for accurate molecular diagnosis.

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Publication Details

Journal
BMC Genomics
Published
2026-02-27
DOI
https://doi.org/10.1186/s12864-026-12701-2
Primary Topic
Platelet Disorders and Treatments
Type
article
Field-Weighted Citation Impact
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article

Full-length haplotype reconstruction of CD36 by long-read sequencing: uncovers a novel structural variant

Yongshui Fu, Weiyi Fu, Faming Zhu, Huatao Che et al.
BMC Genomics
Platelet Disorders and Treatments
article

Full-length haplotype reconstruction of CD36 by long-read sequencing: uncovers a novel structural variant

Yongshui Fu, Weiyi Fu, Faming Zhu, Huatao Che, Fan Wu, Tong Liu, Wenxia Xia, Dawei Cui, Liyan Sun, Shuang Liang
article en

Abstract

This study establishes a robust PolySeq nanopore sequencing-based framework for full-length CD36 haplotype reconstruction and identifies a large structural deletion as a major, previously underrecognized candidate genetic mechanism underlying type I CD36 deficiency. Our findings suggest that many unresolved cases of type I deficiency may be attributable to cryptic structural variants missed by conventional methods, highlighting the necessity of long-read sequencing for accurate molecular diagnosis.

BMC Genomics
Guangzhou First People's Hospital (CN), Blood Center of Zhejiang Province (CN), Beike Biotechnology (China) (CN), Shenzhen Blood Center (CN), First Affiliated Hospital Zhejiang University (CN), Guangzhou Medical University (CN)
Openalex Percentile: Top 41%
Platelet Disorders and Treatments
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