Ecological and stochastic determinants of the growth and persistence of the oral pathogen Porphyromonas gingivalis

Population density plays a critical role in microbial fitness. However, its influence on pathogen colonization remains incompletely understood. Porphyromonas gingivalis (Pg) is a pathogen that plays a major role in periodontitis. It exhibits Allee-type growth and requires a quorum threshold to replicate. Yet, it is frequently detected at low abundance in vivo. We integrate quantitative growth experiments with mathematical modeling to identify ecological and stochastic determinants of Pg persistence. A cubic Allee-effect model quantifies a quorum threshold below which populations collapse. Conditioned medium from Veillonella parvula (Vp) lowers this threshold, indicating early-colonizer facilitation. Stochastic extensions and Fokker-Planck analysis show that microenvironmental noise enables persistence below the Allee barrier. This behavior is consistent with long-term subthreshold experiments that yield persistent survival. Pg-Vp co-cultures further demonstrate replicate rescue outcomes for subcritical inocula. Vp reliably reaches capacity, constraining terminal phases within the experimental horizon to coexistence or Pg extinction. A two-species replicator model maps these outcomes onto a (β, γ) plane. This mapping restricts accessible regions once Vp is established and suggests interventions that reduce facilitation and limit Pg-associated inflammation.

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Publication Details

Journal
npj Systems Biology and Applications
Published
2026-02-26
DOI
https://doi.org/10.1038/s41540-026-00662-x
Primary Topic
Oral microbiology and periodontitis research
Type
article
Field-Weighted Citation Impact
0.00

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article

Ecological and stochastic determinants of the growth and persistence of the oral pathogen Porphyromonas gingivalis

Mohammad A. Qasaimeh, Moemen Hussein, Arnab Barua, Patricia I. Diaz et al.
npj Systems Biology and Applications
Oral microbiology and periodontitis research
article

Ecological and stochastic determinants of the growth and persistence of the oral pathogen Porphyromonas gingivalis

Mohammad A. Qasaimeh, Moemen Hussein, Arnab Barua, Patricia I. Diaz, Matthew Smardz, Haralampos Hatzikirou
article en

Abstract

Population density plays a critical role in microbial fitness. However, its influence on pathogen colonization remains incompletely understood. Porphyromonas gingivalis (Pg) is a pathogen that plays a major role in periodontitis. It exhibits Allee-type growth and requires a quorum threshold to replicate. Yet, it is frequently detected at low abundance in vivo. We integrate quantitative growth experiments with mathematical modeling to identify ecological and stochastic determinants of Pg persistence. A cubic Allee-effect model quantifies a quorum threshold below which populations collapse. Conditioned medium from Veillonella parvula (Vp) lowers this threshold, indicating early-colonizer facilitation. Stochastic extensions and Fokker-Planck analysis show that microenvironmental noise enables persistence below the Allee barrier. This behavior is consistent with long-term subthreshold experiments that yield persistent survival. Pg-Vp co-cultures further demonstrate replicate rescue outcomes for subcritical inocula. Vp reliably reaches capacity, constraining terminal phases within the experimental horizon to coexistence or Pg extinction. A two-species replicator model maps these outcomes onto a (β, γ) plane. This mapping restricts accessible regions once Vp is established and suggests interventions that reduce facilitation and limit Pg-associated inflammation.

npj Systems Biology and Applications
New York University Abu Dhabi (AE), Khalifa University of Science and Technology (AE), New York University (US), University at Buffalo, State University of New York (US), Technische Universität Dresden (DE), Alexandria University (EG)
Volkswagen Foundation, Khalifa University of Science, Technology and Research, National Institutes of Health
Openalex Percentile: Top 44%
Oral microbiology and periodontitis research
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