Unsupervised mapping of urban tree diversity using spatially-aware visual clustering

Urban tree biodiversity is critical for climate resilience, ecological stability, and livability in cities, yet most municipalities lack detailed knowledge of their canopies. Field-based inventories provide reliable estimates of Shannon and Simpson diversity but are costly and time-consuming, while supervised AI methods require labeled data that often fail to generalize across regions. We introduce an unsupervised clustering framework that integrates visual embeddings from street-level imagery with spatial planting patterns to estimate biodiversity without labels. Applied to eight North American cities, the method recovers genus-level diversity patterns with high fidelity, achieving low Wasserstein distances to ground truth for Shannon and Simpson indices and preserving spatial autocorrelation. This scalable, fine-grained approach enables biodiversity mapping in cities lacking detailed inventories and offers a pathway for continuous, low-cost monitoring to support equitable access to greenery and adaptive management of urban ecosystems.

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Publication Details

Journal
Scientific Reports
Published
2026-02-25
DOI
https://doi.org/10.1038/s41598-026-37043-7
Primary Topic
Remote Sensing and LiDAR Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Unsupervised mapping of urban tree diversity using spatially-aware visual clustering

Imran Zualkernan, Diaa Addeen Abuhani, Martina Mazzarello, Fabio Duarte et al.
Scientific Reports
Remote Sensing and LiDAR Applications
article

Unsupervised mapping of urban tree diversity using spatially-aware visual clustering

Imran Zualkernan, Diaa Addeen Abuhani, Martina Mazzarello, Fabio Duarte, Marco Seccaroni, Carlo Ratti
article en

Abstract

Urban tree biodiversity is critical for climate resilience, ecological stability, and livability in cities, yet most municipalities lack detailed knowledge of their canopies. Field-based inventories provide reliable estimates of Shannon and Simpson diversity but are costly and time-consuming, while supervised AI methods require labeled data that often fail to generalize across regions. We introduce an unsupervised clustering framework that integrates visual embeddings from street-level imagery with spatial planting patterns to estimate biodiversity without labels. Applied to eight North American cities, the method recovers genus-level diversity patterns with high fidelity, achieving low Wasserstein distances to ground truth for Shannon and Simpson indices and preserving spatial autocorrelation. This scalable, fine-grained approach enables biodiversity mapping in cities lacking detailed inventories and offers a pathway for continuous, low-cost monitoring to support equitable access to greenery and adaptive management of urban ecosystems.

Scientific ReportsVol. 16(1)
American University of Sharjah (AE), Massachusetts Institute of Technology (US), Politecnico di Milano (IT)
Imperial College London, Weizmann Institute of Science, Kungliga Tekniska Högskolan, Universidad Autónoma de Occidente, Fondazione Centro Studi Enel
Sustainable cities and communities
Openalex Percentile: Top 52%
Remote Sensing and LiDAR Applications
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