A Dataset for Addressing Patient’s Information Needs related to Clinical Course of Hospitalization

Patient's unique information needs about their hospitalization can be addressed using clinical evidence from electronic health records (EHRs) and artificial intelligence (AI). However, robust datasets to assess the factuality and relevance of AI-generated responses are lacking and, to our knowledge, none capture patient information needs in the context of their EHRs. To address this gap, we introduce ArchEHR-QA, an expert-annotated dataset of 134 cases from intensive care unit and emergency department settings. Cases comprise patient questions from public health forums, clinician-interpreted versions, relevant clinical note excerpts with sentence-level relevance annotations, and clinician-authored answers. To establish benchmarks for grounded EHR question answering (QA), we evaluated three open-weight large language models (Llama 4, Llama 3, and Mixtral) across three prompting strategies. We assessed performance on two dimensions: Factuality (overlap between cited and ground truth evidence) and Relevance (similarity to reference answers).

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Publication Details

Journal
Scientific Data
Published
2026-02-25
DOI
https://doi.org/10.1038/s41597-026-06639-z
Primary Topic
Machine Learning in Healthcare
Type
article
Field-Weighted Citation Impact
0.00

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article

A Dataset for Addressing Patient’s Information Needs related to Clinical Course of Hospitalization

Scientific Data
Machine Learning in Healthcare
article

A Dataset for Addressing Patient’s Information Needs related to Clinical Course of Hospitalization

article en

Abstract

Patient's unique information needs about their hospitalization can be addressed using clinical evidence from electronic health records (EHRs) and artificial intelligence (AI). However, robust datasets to assess the factuality and relevance of AI-generated responses are lacking and, to our knowledge, none capture patient information needs in the context of their EHRs. To address this gap, we introduce ArchEHR-QA, an expert-annotated dataset of 134 cases from intensive care unit and emergency department settings. Cases comprise patient questions from public health forums, clinician-interpreted versions, relevant clinical note excerpts with sentence-level relevance annotations, and clinician-authored answers. To establish benchmarks for grounded EHR question answering (QA), we evaluated three open-weight large language models (Llama 4, Llama 3, and Mixtral) across three prompting strategies. We assessed performance on two dimensions: Factuality (overlap between cited and ground truth evidence) and Relevance (similarity to reference answers).

Scientific Data
National Institutes of Health (US), United States National Library of Medicine (US)
U.S. Department of Health and Human Services, National Institutes of Health
Openalex Percentile: Top 47%
Machine Learning in Healthcare
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