Silent Outbreaks of Candida duobushaemulonii in a Pediatric Ward in Brazil

<b>Background</b>: While <i>Candida auris</i> is well known to cause hospital outbreaks, other species in the <i>C. haemulonii</i> complex are less well documented but gained attention as opportunistic pathogens. Only one documented outbreak has been published. We describe the second, silent, fungemia outbreak due to antifungal-susceptible <i>C. duobushaemulonii</i>. <b>Methods</b>: We retrospectively genotyped six <i>C. duobushaemulonii</i> bloodstream isolates, collected in a 4-month-period in 2022 (n = 4) and during a week in 2024 (n = 2) in pediatric patients in Brazil. Whole genome sequencing (WGS) was done and compared to n = 33 publicly available genomes, including four cases from an outbreak in Panama. Antifungal susceptibility was performed with the reference CLSI method. <b>Results</b>: MALDI-TOF-MS identified isolates as either <i>C. pseudohaemulonii</i> or <i>C. duobushaemulonii</i> albeit with low scores. ITS sequence analyses confirmed all isolates as <i>C. duobushaemulonii</i>. WGS proved the presence of an outbreak among four pediatric patients in 2022 and a genetically distinct cluster of two cases in 2024. All six isolates were susceptible to azoles and echinocandins and were interpreted as being resistant to amphotericin B with a MIC at breakpoint of 2 µg/mL. <b>Conclusions</b>: This study describes the second documented outbreak due to the rare yeast <i>C. duobushaemulonii</i>, belonging to the <i>C. haemulonii</i> species complex, during 2022-2024 in patients admitted to a pediatric oncology ward in a Brazilian hospital.

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Journal
Antibiotics
Published
2026-02-25
DOI
https://doi.org/10.3390/antibiotics15030237
Primary Topic
Antifungal resistance and susceptibility
Type
article
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article

Silent Outbreaks of Candida duobushaemulonii in a Pediatric Ward in Brazil

Bram Spruijtenburg, Jacques F. G. M. Meis, Daniel Wagner de Castro Lima Santos, Dayse Azevedo Coelho de Souza et al.
Antibiotics
Antifungal resistance and susceptibility
article

Silent Outbreaks of Candida duobushaemulonii in a Pediatric Ward in Brazil

Bram Spruijtenburg, Jacques F. G. M. Meis, Daniel Wagner de Castro Lima Santos, Dayse Azevedo Coelho de Souza, E J Meijer, Conceição de Maria Pedrozo e Silva de Azevedo
article en

Abstract

<b>Background</b>: While <i>Candida auris</i> is well known to cause hospital outbreaks, other species in the <i>C. haemulonii</i> complex are less well documented but gained attention as opportunistic pathogens. Only one documented outbreak has been published. We describe the second, silent, fungemia outbreak due to antifungal-susceptible <i>C. duobushaemulonii</i>. <b>Methods</b>: We retrospectively genotyped six <i>C. duobushaemulonii</i> bloodstream isolates, collected in a 4-month-period in 2022 (n = 4) and during a week in 2024 (n = 2) in pediatric patients in Brazil. Whole genome sequencing (WGS) was done and compared to n = 33 publicly available genomes, including four cases from an outbreak in Panama. Antifungal susceptibility was performed with the reference CLSI method. <b>Results</b>: MALDI-TOF-MS identified isolates as either <i>C. pseudohaemulonii</i> or <i>C. duobushaemulonii</i> albeit with low scores. ITS sequence analyses confirmed all isolates as <i>C. duobushaemulonii</i>. WGS proved the presence of an outbreak among four pediatric patients in 2022 and a genetically distinct cluster of two cases in 2024. All six isolates were susceptible to azoles and echinocandins and were interpreted as being resistant to amphotericin B with a MIC at breakpoint of 2 µg/mL. <b>Conclusions</b>: This study describes the second documented outbreak due to the rare yeast <i>C. duobushaemulonii</i>, belonging to the <i>C. haemulonii</i> species complex, during 2022-2024 in patients admitted to a pediatric oncology ward in a Brazilian hospital.

AntibioticsVol. 15(3)
Radboud University Nijmegen (NL), University of Cologne (DE), University Medical Center (US), Radboud University Medical Center (NL), Hospital do Câncer III (BR), D’Or Institute for Research and Education (BR), Canisius-Wilhelmina Ziekenhuis (NL), Hospital Universitário da Universidade Federal do Maranhão (BR), Cologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases (DE), Universidade Federal do Maranhão (BR)
Openalex Percentile: Top 44%
Antifungal resistance and susceptibility
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