A cost effective MGB free stem-loop qPCR strategy for high precision microRNA profiling

Numerous techniques are already accessible to measure the expression levels of particular microRNAs in biological specimens. One of the most popular methods and, according to experts in this field, the most accurate method available is the Stem Loop method. In this method, the cDNA of each microRNA is first synthesized explicitly with an adapter’s help. Finally, the measurement uses general reverse primers, specific forward primers, and a specific probe. One of the problems with this method is that the probe binding site is such that in order to have the appropriate melting temperature (Tm), in most cases, it is necessary to bind the MGB molecule to the probe. This protocol requires much expense and significantly increases the cost of the test. In our innovative method, the adapter and the experiment are designed so that to synthesize a suitable probe, there is no need to add the MGB molecule to it, and the probe alone will have the appropriate Tm.

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Publication Details

Journal
Journal of Analytical Science & Technology
Published
2026-02-24
DOI
https://doi.org/10.1186/s40543-026-00535-2
Primary Topic
MicroRNA in disease regulation
Type
article
Field-Weighted Citation Impact
0.00

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article

A cost effective MGB free stem-loop qPCR strategy for high precision microRNA profiling

fereshteh Golab, Mahmood Barati, Ehsan Lotfi, Fatemeh Karamali et al.
Journal of Analytical Science & Technology
MicroRNA in disease regulation
article

A cost effective MGB free stem-loop qPCR strategy for high precision microRNA profiling

fereshteh Golab, Mahmood Barati, Ehsan Lotfi, Fatemeh Karamali, Ali Ghanbari Asad, Mahsa Aghavali
article en

Abstract

Numerous techniques are already accessible to measure the expression levels of particular microRNAs in biological specimens. One of the most popular methods and, according to experts in this field, the most accurate method available is the Stem Loop method. In this method, the cDNA of each microRNA is first synthesized explicitly with an adapter’s help. Finally, the measurement uses general reverse primers, specific forward primers, and a specific probe. One of the problems with this method is that the probe binding site is such that in order to have the appropriate melting temperature (Tm), in most cases, it is necessary to bind the MGB molecule to the probe. This protocol requires much expense and significantly increases the cost of the test. In our innovative method, the adapter and the experiment are designed so that to synthesize a suitable probe, there is no need to add the MGB molecule to it, and the probe alone will have the appropriate Tm.

Journal of Analytical Science & TechnologyVol. 17(1)
Iran University of Medical Sciences (IR), Fasa University of Medical Sciences (IR)
Iran University of Medical Sciences
Openalex Percentile: Top 43%
MicroRNA in disease regulation
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