LightGBM-Based Seizure Detection Method in Pilocarpine Mouse Model of Epilepsy

Electroencephalogram (EEG) has been the gold standard for measuring epileptic activity in rodent models of epilepsy. Manual scoring of seizures in EEG recordings lasting from days to months is laborious and prone to human error. The existing literature on automatic seizure detection in rodent models of epilepsy is limited, and the electrographic characteristics of induced epilepsy significantly differ from those of other epilepsy types. This study employed a Light Gradient Boosting Machine (LightGBM), with the dataset carefully partitioned into separate training and testing sets to ensure no data overlap. The model was trained using five-fold cross-validation to enhance robustness and generalisability. The training, validation, and independent test sets comprised 29,722 h of EEG recordings from 102 mice with pilocarpine-induced temporal lobe epilepsy. Following feature selection, model training, and post-processing, the lightGBM-based model exhibited a sensitivity of 80%, a specificity of 99%, and an F1-score of 0.71 on the independent test set. Multiple pairwise and non-parametric statistical tests indicated that envelope, skewness, and kurtosis, identified as the three most significant features in the feature importance ranking, exhibit statistically significant differences in their distributions (p-value < 0.05). The statistical analysis revealed significant differences across the three features and between seizure and non-seizure events for each feature, highlighting their relevance for discriminating epileptic activity. This study highlights the potential to support the automation of seizure event detection in preclinical rodent models of epilepsy.

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Publication Details

Journal
Algorithms
Published
2026-02-24
DOI
https://doi.org/10.3390/a19030167
Primary Topic
EEG and Brain-Computer Interfaces
Type
article
Field-Weighted Citation Impact
0.00
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article

LightGBM-Based Seizure Detection Method in Pilocarpine Mouse Model of Epilepsy

Tycho M. Hoogland, Christiaan Warner Hoornenborg, Mercy Edoho, Nicolas Partouche et al.
Algorithms
EEG and Brain-Computer Interfaces
article

LightGBM-Based Seizure Detection Method in Pilocarpine Mouse Model of Epilepsy

Tycho M. Hoogland, Christiaan Warner Hoornenborg, Mercy Edoho, Nicolas Partouche, Catherine Mooney, Lan Wei, Stéphane Baudouin
article en

Abstract

Electroencephalogram (EEG) has been the gold standard for measuring epileptic activity in rodent models of epilepsy. Manual scoring of seizures in EEG recordings lasting from days to months is laborious and prone to human error. The existing literature on automatic seizure detection in rodent models of epilepsy is limited, and the electrographic characteristics of induced epilepsy significantly differ from those of other epilepsy types. This study employed a Light Gradient Boosting Machine (LightGBM), with the dataset carefully partitioned into separate training and testing sets to ensure no data overlap. The model was trained using five-fold cross-validation to enhance robustness and generalisability. The training, validation, and independent test sets comprised 29,722 h of EEG recordings from 102 mice with pilocarpine-induced temporal lobe epilepsy. Following feature selection, model training, and post-processing, the lightGBM-based model exhibited a sensitivity of 80%, a specificity of 99%, and an F1-score of 0.71 on the independent test set. Multiple pairwise and non-parametric statistical tests indicated that envelope, skewness, and kurtosis, identified as the three most significant features in the feature importance ranking, exhibit statistically significant differences in their distributions (p-value < 0.05). The statistical analysis revealed significant differences across the three features and between seizure and non-seizure events for each feature, highlighting their relevance for discriminating epileptic activity. This study highlights the potential to support the automation of seizure event detection in preclinical rodent models of epilepsy.

AlgorithmsVol. 19(3)
University College Dublin (IE), UniQure (Netherlands) (NL)
Reduced inequalities
Openalex Percentile: Top 47%
EEG and Brain-Computer Interfaces
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