RUMINA: high-throughput deduplication of unique molecular identifiers for amplicon and whole-genome sequencing with enhanced error correction
RUMINA is implemented in Rust and distributed as open-source code and precompiled binaries. Source code and installation instructions are available at https://github.com/greninger-lab/rumina. Documentation associated with this manuscript is available at https://github.com/greninger-lab/rumina_paper.
Authors
- Eli A. Piliper (ORCID: https://orcid.org/0009-0005-9278-3907)
- Stephanie Goya (ORCID: https://orcid.org/0000-0001-7479-3064)
Institutions
- Infectious Disease Research Institute (US)
- University of Washington Medical Center (US)
- Fred Hutch Cancer Center (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2026-02-24
- DOI
- https://doi.org/10.1093/bioinformatics/btag097
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- University of Washington
- National Institutes of Health