You Only Look Once (YOLO) based machine learning algorithm for real-time detection of loop-mediated isothermal amplification (LAMP) diagnostics
Loop-mediated isothermal amplification (LAMP) is a widely used rapid and affordable molecular DNA amplification method with minimal resource requirements. However, visual interpretation of results is subjective and prone to errors, leading to potential false-positive and negative results. To address this limitation, a machine-learning approach is proposed for automated LAMP classification based on digital images. The approach utilizes You Only Look Once (YOLOv8), a fast and robust object detection algorithm to locate and classify tubes within LAMP images, enabling automated categorization as positive or negative. The trained model achieved a high overall accuracy of 97.4% in classifying LAMP images into positive or negative on the test set. Additionally, the approach had a 95.3% precision and 96.8% recall for positive cases and 93.3% precision and 95.8% recall for negative cases, demonstrating its potential for real-time LAMP diagnosis and enhanced assay performance. This project demonstrated platform suitability for real-time testing, offering an easy operation and rapid results.
Authors
- Bogdan Iuliu Iorga (ORCID: https://orcid.org/0000-0003-0392-1350)
- Biniyam Kahsay Mezgebo
- Johann D. D. Pitout
- S. Ashraf
- Dylan R. Pillai
- J. Burke-Gaffney
- M. Ethan MacDonald
- L. Ricardo Castellanos
- Ryan Chaffee
Institutions
- Centre National de la Recherche Scientifique (FR)
- Institut de Chimie des Substances Naturelles (FR)
- University of Calgary (CA)
- Université Paris-Saclay (FR)
- Alberta Children's Hospital (CA)
- Ross University School of Veterinary Medicine (KN)
- Calgary Laboratory Services (CA)
- Hotchkiss Brain Institute (CA)
Publication Details
- Journal
- PLoS ONE
- Published
- 2026-02-24
- DOI
- https://doi.org/10.1371/journal.pone.0339042
- Primary Topic
- Biosensors and Analytical Detection
- Type
- article
- Field-Weighted Citation Impact
- 0.00