Use of Machine Learning and Large Language Models in Chemical Information Extraction

Rich information in the chemical literature presents unprecedented opportunities for accelerating discovery and optimization in chemistry through data-driven approaches. Nevertheless, converting raw information in the literature into structured databases relies primarily on manual curation, which is time-consuming and costly. In this review, we comprehensively examine recent advances in automatic chemical information extraction from the literature, focusing on image and text modalities. We trace the evolution from early rule-based and machine learning approaches to state-of-the-art methods leveraging large language models (LLMs) and vision language models. We discuss core tasks such as optical chemical structure recognition, reaction diagram parsing, named entity recognition, and experimental procedure extraction, highlighting representative methods, benchmark data sets, and practical challenges such as multimodal integration and data annotation. By systematically comparing these approaches, we identify key trends and persistent limitations and outline promising future directions toward robust, scalable, and automated chemical information extraction frameworks. This review aims to provide a practical guide for researchers seeking to harness machine learning and LLM technologies to accelerate the digital transformation of chemical science.

Authors

Institutions

Publication Details

Journal
Annual Review of Chemical and Biomolecular Engineering
Published
2026-02-23
DOI
https://doi.org/10.1146/annurev-chembioeng-100724-080433
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Use of Machine Learning and Large Language Models in Chemical Information Extraction

Hui Gao, Ching Ting Leung, Yuxuan Zhang, Haifan Zhou et al.
Annual Review of Chemical and Biomolecular Engineering
Machine Learning in Materials Science
article

Use of Machine Learning and Large Language Models in Chemical Information Extraction

Hui Gao, Ching Ting Leung, Yuxuan Zhang, Haifan Zhou, Yufan Chen
article en

Abstract

Rich information in the chemical literature presents unprecedented opportunities for accelerating discovery and optimization in chemistry through data-driven approaches. Nevertheless, converting raw information in the literature into structured databases relies primarily on manual curation, which is time-consuming and costly. In this review, we comprehensively examine recent advances in automatic chemical information extraction from the literature, focusing on image and text modalities. We trace the evolution from early rule-based and machine learning approaches to state-of-the-art methods leveraging large language models (LLMs) and vision language models. We discuss core tasks such as optical chemical structure recognition, reaction diagram parsing, named entity recognition, and experimental procedure extraction, highlighting representative methods, benchmark data sets, and practical challenges such as multimodal integration and data annotation. By systematically comparing these approaches, we identify key trends and persistent limitations and outline promising future directions toward robust, scalable, and automated chemical information extraction frameworks. This review aims to provide a practical guide for researchers seeking to harness machine learning and LLM technologies to accelerate the digital transformation of chemical science.

Annual Review of Chemical and Biomolecular Engineering
Hong Kong University of Science and Technology (HK), University of Hong Kong (HK)
Quality Education
Openalex Percentile: Top 48%
Machine Learning in Materials Science
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.