The chromosomal genome sequence of the lettuce sea slug, Elysia crispata (Mörch, 1863) (Plakobranchidae) and its associated microbial metagenome sequences
<ns3:p> We present a genome assembly from from a specimen of the <ns3:italic>clarki</ns3:italic> ecotype of an individual specimen of the lettuce sea slug <ns3:italic>Elysia crispata</ns3:italic> (lettuce sea slug; Mollusca; Gastropoda; Plakobranchidae). The genome sequence has a total length of 542.56 megabases. Most of the assembly (87.52%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 14.17 kilobases. Additionally, we sequenced the chloroplast genomes of two dietary algae, <ns3:italic>Penicillus capitatus</ns3:italic> and <ns3:italic>P. lamourouxii</ns3:italic> , from plastids sequestered inside of slug cells where they remain photosynthetically active. Gene annotation of this assembly by Ensembl identified 18 436 protein-coding genes. From the metagenome data, we recovered six bins, of which four were high-quality MAGs. </ns3:p>
Authors
- Noah Gettle (ORCID: https://orcid.org/0000-0003-3407-4086)
- Nina M. Pruzinsky (ORCID: https://orcid.org/0000-0002-7971-2937)
- Patrick J. Krug (ORCID: https://orcid.org/0000-0002-4573-8944)
- Michael L. Middlebrooks (ORCID: https://orcid.org/0000-0002-8612-1801)
- EBI Aquatic Symbiosis Genomics Data Portal Team
- Aquatic Symbiosis Genomics Project Leadership
- Haoyu Niu
- Jose Victor Lopez
- Rebecca O’Brien
- Michael Paulini
- John Pettingill
- Elizabeth Sinclair
- Graeme Oatley
- Eerik Aunin
- Victoria McKenna
- Camilla Santos
- Nicholas Curtis
Publication Details
- Journal
- Wellcome Open Research
- Published
- 2026-02-23
- DOI
- https://doi.org/10.12688/wellcomeopenres.26088.1
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00