The chromosomal genome sequence of the lettuce sea slug, Elysia crispata (Mörch, 1863) (Plakobranchidae) and its associated microbial metagenome sequences

<ns3:p> We present a genome assembly from from a specimen of the <ns3:italic>clarki</ns3:italic> ecotype of an individual specimen of the lettuce sea slug <ns3:italic>Elysia crispata</ns3:italic> (lettuce sea slug; Mollusca; Gastropoda; Plakobranchidae). The genome sequence has a total length of 542.56 megabases. Most of the assembly (87.52%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 14.17 kilobases. Additionally, we sequenced the chloroplast genomes of two dietary algae, <ns3:italic>Penicillus capitatus</ns3:italic> and <ns3:italic>P. lamourouxii</ns3:italic> , from plastids sequestered inside of slug cells where they remain photosynthetically active. Gene annotation of this assembly by Ensembl identified 18 436 protein-coding genes. From the metagenome data, we recovered six bins, of which four were high-quality MAGs. </ns3:p>

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Publication Details

Journal
Wellcome Open Research
Published
2026-02-23
DOI
https://doi.org/10.12688/wellcomeopenres.26088.1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

The chromosomal genome sequence of the lettuce sea slug, Elysia crispata (Mörch, 1863) (Plakobranchidae) and its associated microbial metagenome sequences

Noah Gettle, Nina M. Pruzinsky, Patrick J. Krug, Michael L. Middlebrooks et al.
Wellcome Open Research
Genomics and Phylogenetic Studies
article

The chromosomal genome sequence of the lettuce sea slug, Elysia crispata (Mörch, 1863) (Plakobranchidae) and its associated microbial metagenome sequences

Noah Gettle, Nina M. Pruzinsky, Patrick J. Krug, Michael L. Middlebrooks, EBI Aquatic Symbiosis Genomics Data Portal Team, Aquatic Symbiosis Genomics Project Leadership, Haoyu Niu, Jose Victor Lopez, Rebecca O’Brien, Michael Paulini, John Pettingill, Elizabeth Sinclair, Graeme Oatley, Eerik Aunin, Victoria McKenna, Camilla Santos, Nicholas Curtis
article en

Abstract

<ns3:p> We present a genome assembly from from a specimen of the <ns3:italic>clarki</ns3:italic> ecotype of an individual specimen of the lettuce sea slug <ns3:italic>Elysia crispata</ns3:italic> (lettuce sea slug; Mollusca; Gastropoda; Plakobranchidae). The genome sequence has a total length of 542.56 megabases. Most of the assembly (87.52%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 14.17 kilobases. Additionally, we sequenced the chloroplast genomes of two dietary algae, <ns3:italic>Penicillus capitatus</ns3:italic> and <ns3:italic>P. lamourouxii</ns3:italic> , from plastids sequestered inside of slug cells where they remain photosynthetically active. Gene annotation of this assembly by Ensembl identified 18 436 protein-coding genes. From the metagenome data, we recovered six bins, of which four were high-quality MAGs. </ns3:p>

Wellcome Open ResearchVol. 11
Life below water
Openalex Percentile: Top 45%
Genomics and Phylogenetic Studies
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