Cultured <i>versus</i> wild zooplankton and mixoplankton in experimental ecology: what we gain, what we lose and how to bridge the gap

ABSTRACT Laboratory cultures are foundational to marine zooplankton and mixoplankton ecology because they enable controlled, replicated experiments, life-cycle closure and mechanistic inference for theory, modeling, aquaculture and ecotoxicology. Their transferability to nature, however, is filtered by a small number of processes. First, a cultivability bottleneck restricts long-term cultures to a biased subset of handling-tolerant taxa, leaving many oceanic, fragile, or diapause-programmed species underrepresented. This is further complicated by strain-specific divergence and cryptic species. Second, sustained laboratory regimes impose interacting effects of selection and domestication-like adaptation that can shift trait means and reaction norms, particularly for variance- and risk-sensitive traits. Third, chronic laboratory crowding constitutes a distinct selective and plasticity-shaping environment. Fourth, holobiont reassembly in culture alters host–microbiome interactions linked to feeding, detoxification and stress responses. Importantly, phenotypic responses measured in wild populations are also conditional on genetic structure, recent acclimation and carry-over effects; thus, neither cultured nor wild measurements represent neutral baselines. Because grazing and tolerance parameters derived from cultures and short-term field assays dominate uncertainty in ecosystem and biogeochemical models, uncalibrated bias in either direction can propagate into large projection errors. I outline some bridging strategies to map laboratory-derived traits explicitly onto wild trait space.

Authors

Institutions

Publication Details

Journal
Journal of Plankton Research
Published
2026-01-26
DOI
https://doi.org/10.1093/plankt/fbag008
Primary Topic
Marine and coastal ecosystems
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Cultured versus wild zooplankton and mixoplankton in experimental ecology: what we gain, what we lose and how to bridge the gap

Albert Calbet
Journal of Plankton Research
Marine and coastal ecosystems
article

Cultured versus wild zooplankton and mixoplankton in experimental ecology: what we gain, what we lose and how to bridge the gap

Albert Calbet
article en

Abstract

ABSTRACT Laboratory cultures are foundational to marine zooplankton and mixoplankton ecology because they enable controlled, replicated experiments, life-cycle closure and mechanistic inference for theory, modeling, aquaculture and ecotoxicology. Their transferability to nature, however, is filtered by a small number of processes. First, a cultivability bottleneck restricts long-term cultures to a biased subset of handling-tolerant taxa, leaving many oceanic, fragile, or diapause-programmed species underrepresented. This is further complicated by strain-specific divergence and cryptic species. Second, sustained laboratory regimes impose interacting effects of selection and domestication-like adaptation that can shift trait means and reaction norms, particularly for variance- and risk-sensitive traits. Third, chronic laboratory crowding constitutes a distinct selective and plasticity-shaping environment. Fourth, holobiont reassembly in culture alters host–microbiome interactions linked to feeding, detoxification and stress responses. Importantly, phenotypic responses measured in wild populations are also conditional on genetic structure, recent acclimation and carry-over effects; thus, neither cultured nor wild measurements represent neutral baselines. Because grazing and tolerance parameters derived from cultures and short-term field assays dominate uncertainty in ecosystem and biogeochemical models, uncalibrated bias in either direction can propagate into large projection errors. I outline some bridging strategies to map laboratory-derived traits explicitly onto wild trait space.

Journal of Plankton ResearchVol. 48(2)
Institut Català de Ciències del Clima (ES), Institut de Ciències del Mar (ES)
European Regional Development Fund, Agencia Estatal de Investigación
Life below water
Openalex Percentile: Top 53%
Marine and coastal ecosystems
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.