Benchmarking of vibrational exciton models against quantum-chemical localized-mode calculations
Vibrational exciton models are widely used for the simulation of biomolecular vibrational spectra, particularly two-dimensional infrared spectra. The parameters entering such models, specifically harmonic local-mode frequencies and harmonic coupling constants, are provided by vibrational maps, which have been parameterized against computational data for small molecules as well as experimental data. Here, we put forward a novel approach for assessing the quality of these harmonic vibrational maps against quantum-chemical reference data. For a test set consisting of molecular dynamics snapshots of polypeptides and small proteins, covering different secondary structure motifs, we performed full quantum-chemical calculations of harmonic vibrational frequencies and normal modes and applied a localization of normal modes to obtain localized-mode frequencies and coupling constants. These can be directly compared to those predicted by vibrational maps. We find that while there is a good correlation for the coupling constants and for local-mode frequencies of isolated polypeptides, there is hardly any correlation for the local-mode frequencies of solvated polypeptides. This striking finding calls into question the accuracy of the electrostatic maps that are used to model the effect of the solvent molecules on local-mode frequencies.
Authors
- Mario Wolter (ORCID: https://orcid.org/0000-0001-6948-6801)
- Christoph R. Jacob (ORCID: https://orcid.org/0000-0002-6227-8476)
- Kevin Focke (ORCID: https://orcid.org/0009-0009-9079-1769)
- Anna Maria Van Bodegraven (ORCID: https://orcid.org/0009-0005-1559-7422)
Institutions
- Technische Universität Braunschweig (DE)
Publication Details
- Journal
- The Journal of Chemical Physics
- Published
- 2026-02-23
- DOI
- https://doi.org/10.1063/5.0322117
- Primary Topic
- Spectroscopy and Quantum Chemical Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00