Human and environmental controls on soil contamination in a dust-prone region revealed by random forest and Shapley additive explanations analysis

Accurate prediction of the spatial distribution of potentially toxic elements (PTEs) and identification of the most important environmental drivers are essential for reducing their adverse effects on human health and the environment. In this regard, the present study was conducted to predict the spatial distribution of arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), and lead (Pb) in a dust-prone area of central Iran using the RF model under 11 scenarios constructed based on human activity-based factors (HAF), land-based factors (LSF), physicochemical soil properties) PSP), meteorological factors (MF), and remote sensing auxiliary data (RSAD). The overall contribution of the influencing factors in predicting soil PTEs was determined using the SHapley additive exPlanations (SHAP) analysis. Soil PTEs and some other properties of 107 surface soil samples were measured in the laboratory. The best performance of RF in predicting As, Co, and Cr was observed under scenario VI (HAF + PSP) with the R<sup>2</sup> value of 0.59, 0.60, and 0.58, respectively. The RF under Scenario X (PSP + LSF+HAF+RSAD) showed the best performance in predicting Cd (R<sup>2</sup> = 0.67). The performance of RF for predicting Pb was weak in all scenarios (R<sup>2</sup> < 0.38). The contributions of HAF, LSF, PSP, and RSAD in predicting Cd were 54.9, 21.5, 18.3, and 5.2%, respectively. On average, the contributions of HAF and PSP to the prediction of the other three PTEs were 55.6 and 44.4%, respectively. Among these categories, distance to industries, calcium, magnesium, magnetic susceptibility, terrain ruggedness index, and distance to rivers were identified as the most important predictors. Our findings are useful for improving soil management to reduce the adverse effects of PTEs in arid environments.

Authors

Institutions

Publication Details

Journal
Scientific Reports
Published
2026-02-21
DOI
https://doi.org/10.1038/s41598-026-40377-x
Primary Topic
Heavy metals in environment
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Human and environmental controls on soil contamination in a dust-prone region revealed by random forest and Shapley additive explanations analysis

Narjes Okati, Seyed Arman Samadi-Todar, Zohre Ebrahimi-Khusfi, Shamsollah Ayoubi
Scientific Reports
Heavy metals in environment
article

Human and environmental controls on soil contamination in a dust-prone region revealed by random forest and Shapley additive explanations analysis

Narjes Okati, Seyed Arman Samadi-Todar, Zohre Ebrahimi-Khusfi, Shamsollah Ayoubi
article en

Abstract

Accurate prediction of the spatial distribution of potentially toxic elements (PTEs) and identification of the most important environmental drivers are essential for reducing their adverse effects on human health and the environment. In this regard, the present study was conducted to predict the spatial distribution of arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), and lead (Pb) in a dust-prone area of central Iran using the RF model under 11 scenarios constructed based on human activity-based factors (HAF), land-based factors (LSF), physicochemical soil properties) PSP), meteorological factors (MF), and remote sensing auxiliary data (RSAD). The overall contribution of the influencing factors in predicting soil PTEs was determined using the SHapley additive exPlanations (SHAP) analysis. Soil PTEs and some other properties of 107 surface soil samples were measured in the laboratory. The best performance of RF in predicting As, Co, and Cr was observed under scenario VI (HAF + PSP) with the R<sup>2</sup> value of 0.59, 0.60, and 0.58, respectively. The RF under Scenario X (PSP + LSF+HAF+RSAD) showed the best performance in predicting Cd (R<sup>2</sup> = 0.67). The performance of RF for predicting Pb was weak in all scenarios (R<sup>2</sup> < 0.38). The contributions of HAF, LSF, PSP, and RSAD in predicting Cd were 54.9, 21.5, 18.3, and 5.2%, respectively. On average, the contributions of HAF and PSP to the prediction of the other three PTEs were 55.6 and 44.4%, respectively. Among these categories, distance to industries, calcium, magnesium, magnetic susceptibility, terrain ruggedness index, and distance to rivers were identified as the most important predictors. Our findings are useful for improving soil management to reduce the adverse effects of PTEs in arid environments.

Scientific ReportsVol. 16(1)
Zabol University (IR), University of Jiroft (IR), Isfahan University of Technology (IR), University of Tehran (IR)
National Science Foundation, Iran National Science Foundation
Life in Land
Openalex Percentile: Top 49%
Heavy metals in environment
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.