Tensor-cell2cell v2 unravels coordinated dynamics of protein- and metabolite-mediated cell–cell communication

Tensor-cell2cell v2 and its new coupled tensor component analysis are implemented in Python and available as part of the cell2cell framework at https://github.com/earmingol/cell2cell. This python library is available on PyPI. Code for the analyses of this manuscript can be found in a Code Ocean capsule at https://doi.org/10.24433/CO.0061424.v3, where analyses can be also run and reproduced online. Tutorials can be found at https://cell2cell.readthedocs.io.

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Publication Details

Journal
Bioinformatics
Published
2026-02-01
DOI
https://doi.org/10.1093/bioinformatics/btaf667
Citations
1
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
22.24
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article

Tensor-cell2cell v2 unravels coordinated dynamics of protein- and metabolite-mediated cell–cell communication

Reid O. Larsen, Martin Cequeira, Nathan E Lewis, Hratch Baghdassarian et al.
1 citations
Bioinformatics
Single-cell and spatial transcriptomics
22.24
article

Tensor-cell2cell v2 unravels coordinated dynamics of protein- and metabolite-mediated cell–cell communication

Reid O. Larsen, Martin Cequeira, Nathan E Lewis, Hratch Baghdassarian, Lia Gale
article en
1 citations

Abstract

Tensor-cell2cell v2 and its new coupled tensor component analysis are implemented in Python and available as part of the cell2cell framework at https://github.com/earmingol/cell2cell. This python library is available on PyPI. Code for the analyses of this manuscript can be found in a Code Ocean capsule at https://doi.org/10.24433/CO.0061424.v3, where analyses can be also run and reproduced online. Tutorials can be found at https://cell2cell.readthedocs.io.

BioinformaticsVol. 42(2)
University of Georgia (US), University of California San Diego (US), La Jolla Bioengineering Institute (US)
Life below water
Openalex Percentile: Top 1%
Single-cell and spatial transcriptomics
22.24
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