The first complete chloroplast genome sequence of an early spring flowering plant, <i>Corydalis repens</i>

<i>Corydalis repens</i> Mandl & Muhldorf is an early spring-blooming species within the genus <i>Corydalis</i>. In this study, we present the complete chloroplast genome of <i>C. repens</i> for the first time. The assembled genome is 188,101 base pairs (bp) long and is organized into a typical quadripartite structure consisting of a large single-copy (LSC) region of 89,844 bp, a small single-copy (SSC) region of 757 bp, and two inverted repeat (IR) regions totaling 48,750 bp. The overall GC content is 40.2%. The plastome encodes 141 genes, including 94 protein-coding genes, 38 transfer RNA genes, and eight ribosomal RNA genes, along with a single pseudogene (<i>clpP</i>). Phylogenetic reconstruction indicates that <i>C. repens</i> is nested within section <i>Corydalis</i> and shows the closest affinity to <i>C. maculata</i>. These findings provide an important genetic resource for future studies on the evolutionary history and conservation of the genus <i>Corydalis</i>.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2026-02-19
DOI
https://doi.org/10.1080/23802359.2025.2603836
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

The first complete chloroplast genome sequence of an early spring flowering plant, Corydalis repens

Huanchu Liu, Xingyuan He, Yun Huang, Ying Liu et al.
Mitochondrial DNA Part B
Genomics and Phylogenetic Studies
article

The first complete chloroplast genome sequence of an early spring flowering plant, Corydalis repens

Huanchu Liu, Xingyuan He, Yun Huang, Ying Liu, Wei Chen
article en

Abstract

<i>Corydalis repens</i> Mandl & Muhldorf is an early spring-blooming species within the genus <i>Corydalis</i>. In this study, we present the complete chloroplast genome of <i>C. repens</i> for the first time. The assembled genome is 188,101 base pairs (bp) long and is organized into a typical quadripartite structure consisting of a large single-copy (LSC) region of 89,844 bp, a small single-copy (SSC) region of 757 bp, and two inverted repeat (IR) regions totaling 48,750 bp. The overall GC content is 40.2%. The plastome encodes 141 genes, including 94 protein-coding genes, 38 transfer RNA genes, and eight ribosomal RNA genes, along with a single pseudogene (<i>clpP</i>). Phylogenetic reconstruction indicates that <i>C. repens</i> is nested within section <i>Corydalis</i> and shows the closest affinity to <i>C. maculata</i>. These findings provide an important genetic resource for future studies on the evolutionary history and conservation of the genus <i>Corydalis</i>.

Mitochondrial DNA Part BVol. 11(3)
Chinese Academy of Sciences (CN), Institute of Applied Ecology (CN), Shenyang Institute of Computing Technology (China) (CN), State Forestry and Grassland Administration (CN), Development Research Center (CN)
Zero hunger
Openalex Percentile: Top 50%
Genomics and Phylogenetic Studies
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The first complete chloroplast genome sequence of an early spring flowering plant, <i>Corydalis repens</i> — Huanchu Liu, Xingyuan He, et al. · Mitochondrial DNA Part B (2026) | TGRS Research Map | TGRS